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一种用于对使用显微镜的高分辨率CMOS传感器拍摄的图像上的蜱虫发育阶段进行分类的深度学习方法。

A Deep Learning Approach for Classifying Developmental Stages of Ticks on Images Captured Using a Microscope's High-Resolution CMOS Sensor.

作者信息

Marzec Aleksandra, Filipowska Anna, Humeniuk Oliwia, Filipowski Wojciech, Raif Paweł

机构信息

Foundation of Cardiac Surgery Development, Institute of Heart Prostheses, 345a Wolności, 41-800 Zabrze, Poland.

Department of Medical Informatics and Artificial Intelligence, Faculty of Biomedical Engineering, Silesian University of Technology, Roosevelta 40, 41-800 Zabrze, Poland.

出版信息

Sensors (Basel). 2025 Aug 14;25(16):5038. doi: 10.3390/s25165038.

DOI:10.3390/s25165038
PMID:40871901
Abstract

This article presents a deep learning approach for classifying the developmental stages (larvae, nymphs, adult females, and adult males) of ticks, the most common tick species in Europe and a major vector of tick-borne pathogens, including , , and tick-borne encephalitis virus (TBEV). Each developmental stage plays a different role in disease transmission, with nymphs considered the most epidemiologically relevant stage due to their small size and high prevalence. We developed a convolutional neural network (CNN) model trained on a dataset of microscopic tick images collected in the area of Upper Silesia, Poland. Grad-CAM, an XAI technique, was used to identify the regions of the image that most influenced the model's decisions. This work is the first to utilize a CNN model for the identification of European tick fauna stages. Compared to existing solutions focused on North American tick species, our model addresses the specific challenge of distinguishing developmental stages within . This solution has the potential to be a valuable tool in entomology, healthcare, and tick-borne disease management.

摘要

本文提出了一种深度学习方法,用于对蜱虫的发育阶段(幼虫、若虫、成年雌性和成年雄性)进行分类。蜱虫是欧洲最常见的蜱种,也是包括 、 和蜱传脑炎病毒(TBEV)在内的蜱传病原体的主要传播媒介。每个发育阶段在疾病传播中都起着不同的作用,由于若虫体型小且患病率高,被认为是流行病学上最相关的阶段。我们开发了一个卷积神经网络(CNN)模型,该模型基于在波兰上西里西亚地区收集的蜱虫微观图像数据集进行训练。使用一种可解释人工智能(XAI)技术Grad-CAM来识别对模型决策影响最大的图像区域。这项工作首次利用CNN模型来识别欧洲蜱类动物的发育阶段。与专注于北美蜱种的现有解决方案相比,我们的模型解决了区分 内发育阶段的特定挑战。该解决方案有可能成为昆虫学、医疗保健和蜱传疾病管理中的一个有价值的工具。

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本文引用的文献

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Molecular Detection and Characterization of Tick-Borne Pathogens in Ticks Collected from Humans.从人体采集的蜱虫中蜱传病原体的分子检测与鉴定
Pathogens. 2025 May 25;14(6):528. doi: 10.3390/pathogens14060528.
2
Assessment of the speed of transmission of Ehrlichia canis, Anaplasma phagocytophilum, and Borrelia burgdorferi sensu stricto by infected ticks through an in vitro experimental model.通过体外实验模型评估感染蜱传播犬埃立克体、嗜吞噬细胞无形体和狭义伯氏疏螺旋体的传播速度。
Parasit Vectors. 2025 May 20;18(1):182. doi: 10.1186/s13071-025-06798-9.
3
Multiple factors affecting Ixodes ricinus ticks and associated pathogens in European temperate ecosystems (northeastern France).
影响欧洲温带生态系统(法国东北部)蓖麻硬蜱及相关病原体的多种因素
Sci Rep. 2024 Apr 24;14(1):9391. doi: 10.1038/s41598-024-59867-x.
4
Automated precision beekeeping for accessing bee brood development and behaviour using deep CNN.使用深度卷积神经网络实现蜜蜂幼虫发育和行为的自动化精准养蜂
Bull Entomol Res. 2024 Feb;114(1):77-87. doi: 10.1017/S0007485323000639. Epub 2024 Jan 5.
5
Wing Interferential Patterns (WIPs) and machine learning for the classification of some Aedes species of medical interest.翅旁干涉纹(WIPs)与机器学习在一些医学关注的伊蚊种分类上的应用。
Sci Rep. 2023 Oct 17;13(1):17628. doi: 10.1038/s41598-023-44945-3.
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Automatic identification of medically important mosquitoes using embedded learning approach-based image-retrieval system.基于嵌入式学习方法的图像检索系统对医学重要蚊虫的自动识别。
Sci Rep. 2023 Jun 30;13(1):10609. doi: 10.1038/s41598-023-37574-3.
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The biology of Ixodes ricinus with emphasis on its ecology.蓖麻硬蜱的生物学,重点是其生态学。
Ticks Tick Borne Dis. 2023 Mar;14(2):102114. doi: 10.1016/j.ttbdis.2022.102114. Epub 2022 Dec 26.
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IEEE J Transl Eng Health Med. 2021 Dec 30;10:4900308. doi: 10.1109/JTEHM.2021.3137956. eCollection 2022.
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