Nakamura Muneaki, Ivec Alexis E, Gao Yuchen, Qi Lei S
Department of Bioengineering, Stanford, CA 94305USA.
Program in Human Biology, Stanford, CA 94305USA.
Biodes Res. 2021 Jun 30;2021:9815820. doi: 10.34133/2021/9815820. eCollection 2021.
Development of CRISPR-based epigenome editing tools is important for the study and engineering of biological behavior. Here, we describe the design of a reporter system for quantifying the ability of CRISPR epigenome editors to produce a stable gene repression. We characterize the dynamics of durable gene silencing and reactivation, as well as the induced epigenetic changes of this system. We report the creation of single-protein CRISPR constructs bearing combinations of three epigenetic editing domains, termed KAL, that can stably repress the gene expression. This system should allow for the development of novel epigenome editing tools which will be useful in a wide array of biological research and engineering applications.
基于CRISPR的表观基因组编辑工具的开发对于生物行为的研究和工程化具有重要意义。在此,我们描述了一种报告系统的设计,用于量化CRISPR表观基因组编辑器产生稳定基因抑制的能力。我们表征了持久基因沉默和重新激活的动力学,以及该系统诱导的表观遗传变化。我们报告了创建携带三个表观遗传编辑结构域组合的单蛋白CRISPR构建体,称为KAL,其可稳定抑制基因表达。该系统应有助于开发新型表观基因组编辑工具,这将在广泛的生物学研究和工程应用中发挥作用。