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针对毛霉菌病和曲霉病的精油成分分析及分子对接研究

Compositional profiling and molecular docking studies of essential oil against mucormycosis and aspergillosis.

作者信息

Sharma Arun Dev, Kaur Inderjeet, Chauhan Amrita

机构信息

Post Graduate Department of Biotechnology, Lyallpur Khalsa College Jalandhar, Jalandhar, Punjab, India.

出版信息

BioTechnologia (Pozn). 2023 Sep 25;104(3):233-245. doi: 10.5114/bta.2023.130727. eCollection 2023.

Abstract

Essential oil (EO) from is used as complementary and traditional medicine worldwide. The present study aimed at compositional profiling of EO and molecular docking of EO's bioactive compound 1,8 cineole against fungal enzymes involved in the riboflavin synthesis pathway, namely riboflavin synthase (RS), riboflavin biosynthesis protein RibD domain-containing protein (RibD), and 3,4-dihydroxy-2-butanone 4-phosphate synthase (DBPS) as apposite sites for drug designing against aspergillosis and mucormycosis, and confirmation. The compositional profile of EO was completed by GC-FID analysis. For molecular docking, the Patchdock tool was used. The ligand-enzyme 3-D interactions were examined, and ADMET properties (absorption, distribution, metabolism, excretion, and toxicity) were calculated. GC-FID discovered the occurrence of 1,8 cineole as a major component in EO, which was subsequently used for docking analysis. The docking analysis revealed that 1,8 cineole actively bound to RS, RibD, and DBPS fungal enzymes. The results of the docking studies demonstrated that the ligand 1,8 cineole exhibited H-bond and hydrophobic interactions with RS, RibD, and DBPS fungal enzymes. 1,8 cineole obeyed Lpinsky's rule and exhibited adequate bioactivity. Wet-lab authentication was achieved by using three fungal strains: , and . Wet lab results indicated that EO was able to inhibit fungal growth.

摘要

来自[具体来源未提及]的精油(EO)在全球范围内被用作补充和传统药物。本研究旨在对EO进行成分分析,并对EO的生物活性化合物1,8-桉叶素与参与核黄素合成途径的真菌酶进行分子对接,这些酶即核黄素合酶(RS)、含核黄素生物合成蛋白RibD结构域的蛋白(RibD)以及3,4-二羟基-2-丁酮4-磷酸合酶(DBPS),作为针对曲霉病和毛霉病药物设计的合适靶点,并进行验证。通过气相色谱-火焰离子化检测(GC-FID)分析完成了EO的成分分析。对于分子对接,使用了Patchdock工具。研究了配体-酶的三维相互作用,并计算了药物代谢动力学性质(吸收、分布、代谢、排泄和毒性)。GC-FID发现1,8-桉叶素是EO中的主要成分,随后将其用于对接分析。对接分析表明1,8-桉叶素能与RS、RibD和DBPS真菌酶有效结合。对接研究结果表明,配体1,8-桉叶素与RS、RibD和DBPS真菌酶表现出氢键和疏水相互作用。1,8-桉叶素符合Lipinski规则并表现出足够的生物活性。通过使用三种真菌菌株[具体菌株未提及]进行了湿实验室验证。湿实验室结果表明EO能够抑制真菌生长。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c2e8/10578112/9c22b7f679c9/BTA-104-3-51300-g001.jpg

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