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从 Gelidibacter salicanalis PAMC21136 中分离出的汞还原酶 GbsMerA 的生化和结构基础。

Biochemical and structural basis of mercuric reductase, GbsMerA, from Gelidibacter salicanalis PAMC21136.

机构信息

Department of Life Science and Biochemical Engineering, Graduate School, SunMoon University, Asan, 31460, Republic of Korea.

Research Unit of Cryogenic Novel Material, Korea Polar Research Institute, Incheon, 21990, Republic of Korea.

出版信息

Sci Rep. 2023 Oct 19;13(1):17854. doi: 10.1038/s41598-023-44968-w.

DOI:10.1038/s41598-023-44968-w
PMID:37857791
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10587081/
Abstract

Heavy metals, including mercury, are non-biodegradable and highly toxic to microorganisms even at low concentrations. Understanding the mechanisms underlying the environmental adaptability of microorganisms with Hg resistance holds promise for their use in Hg bioremediation. We characterized GbsMerA, a mercury reductase belonging to the mercury-resistant operon of Gelidibacter salicanalis PAMC21136, and found its maximum activity of 474.7 µmol/min/mg in reducing Hg. In the presence of Ag and Mn, the enzyme exhibited moderate activity as 236.5 µmol/min/mg and 69 µmol/min/mg, respectively. GbsMerA exhibited optimal activity at pH 7.0 and a temperature of 60 °C. Moreover, the crystal structure of GbsMerA and structural comparison with homologues indicated that GbsMerA contains residues, Tyr437´ and Asp47, which may be responsible for metal transfer at the si-face by providing a hydroxyl group (-OH) to abstract a proton from the thiol group of cysteine. The complex structure with NADPH indicated that Y174 in the re-face can change its side chain direction upon NADPH binding, indicating that Y174 may have a role as a gate for NADPH binding. Moreover, the heterologous host expressing GbsMerA (pGbsMerA) is more resistant to Hg toxicity when compared to the host lacking GbsMerA. Overall, this study provides a background for understanding the catalytic mechanism and Hg detoxification by GbsMerA and suggests the application of genetically engineered E. coli strains for environmental Hg removal.

摘要

重金属,包括汞,是非生物降解的,即使在低浓度下对微生物也具有高度毒性。了解具有汞抗性的微生物的环境适应性的机制,有望将其用于汞的生物修复。我们对属于 Gelidibacter salicanalis PAMC21136 汞抗性操纵子的汞还原酶 GbsMerA 进行了表征,并发现其还原汞的最大活性为 474.7µmol/min/mg。在 Ag 和 Mn 的存在下,该酶的活性分别为 236.5µmol/min/mg 和 69µmol/min/mg。GbsMerA 在 pH7.0 和 60°C 时表现出最佳活性。此外,GbsMerA 的晶体结构和与同源物的结构比较表明,GbsMerA 包含残基 Tyr437´和 Asp47,它们可能通过向半胱氨酸的巯基提供一个羟基(-OH)来从硫醇基团中提取质子,从而负责 si-面的金属转移。与 NADPH 的复合物结构表明,re-面的 Y174 在结合 NADPH 时可以改变其侧链方向,这表明 Y174 可能在 NADPH 结合中起门控作用。此外,与缺乏 GbsMerA 的宿主相比,表达 GbsMerA(pGbsMerA)的异源宿主对 Hg 毒性更具抗性。总的来说,这项研究为理解 GbsMerA 的催化机制和 Hg 解毒提供了背景,并为利用基因工程大肠杆菌菌株去除环境中的 Hg 提供了思路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ee/10587081/050b862c6812/41598_2023_44968_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ee/10587081/7ae4177db719/41598_2023_44968_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ee/10587081/51c016a19e84/41598_2023_44968_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ee/10587081/050b862c6812/41598_2023_44968_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ee/10587081/7ae4177db719/41598_2023_44968_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ee/10587081/51c016a19e84/41598_2023_44968_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ee/10587081/050b862c6812/41598_2023_44968_Fig6_HTML.jpg

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