Department of Biosciences, University of Oslo, Section for Biochemistry and Molecular Biology, P.O. Box 1066, Blindern, NO-0316, Oslo, Norway.
Department of Biosciences, University of Oslo, Section for Biochemistry and Molecular Biology, P.O. Box 1066, Blindern, NO-0316, Oslo, Norway; Department of Chemistry, University of Oslo, Section for Chemical Life Sciences, University of Oslo, P.O. Box 1033, Blindern, NO-0315, Oslo, Norway.
Arch Biochem Biophys. 2021 May 15;702:108826. doi: 10.1016/j.abb.2021.108826. Epub 2021 Mar 5.
Structural studies show that enzymes have a limited number of unique folds, although structurally related enzymes have evolved to perform a large variety of functions. In this review, we have focused on enzymes containing the low molecular weight thioredoxin reductase (low M TrxR) fold. This fold consists of two domains, both containing a three-layer ββα sandwich Rossmann-like fold, serving as flavin adenine dinucleotide (FAD) and, in most cases, pyridine nucleotide (NAD(P)H) binding-domains. Based on a search of the Protein Data Bank for all published structures containing the low M TrxR-like fold, we here present a comprehensive overview of enzymes with this structural architecture. These range from TrxR-like ferredoxin/flavodoxin NAD(P) oxidoreductases, through glutathione reductase, to NADH peroxidase. Some enzymes are solely composed of the low M TrxR-like fold, while others contain one or two additional domains. In this review, we give a detailed description of selected enzymes containing only the low M TrxR-like fold, however, catalyzing a diversity of chemical reactions. Our overview of this structurally similar, yet functionally distinct group of flavoprotein oxidoreductases highlights the fascinating and increasing number of studies describing the diversity among these enzymes, especially during the last decade(s).
结构研究表明,尽管结构相关的酶已经进化到能够执行多种功能,但酶只具有有限数量的独特折叠。在这篇综述中,我们重点关注含有低分子量硫氧还蛋白还原酶(low M TrxR)折叠的酶。这种折叠由两个结构域组成,都包含一个三层ββα三明治 Rossmann 样折叠,作为黄素腺嘌呤二核苷酸(FAD)和,在大多数情况下,吡啶核苷酸(NAD(P)H)结合结构域。基于对包含低 M TrxR 样折叠的所有已发表结构的蛋白质数据库的搜索,我们在此呈现了具有这种结构架构的酶的综合概述。这些酶的范围从 TrxR 样的铁氧还蛋白/黄素蛋白 NAD(P)氧化还原酶,到谷胱甘肽还原酶,再到 NADH 过氧化物酶。一些酶仅由低 M TrxR 样折叠组成,而其他酶则包含一个或两个额外的结构域。在这篇综述中,我们详细描述了仅含有低 M TrxR 样折叠的选定酶,但它们催化着多种化学反应。我们对这组结构相似但功能不同的黄素蛋白氧化还原酶的概述突出了令人着迷的、数量不断增加的研究,这些研究描述了这些酶之间的多样性,尤其是在过去十年中。