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通过发布可计算生物医学知识(CBK)来改变健康与福祉。

Transforming health and well-being through publishing computable biomedical knowledge (CBK).

作者信息

Koru Güneş

机构信息

Department of Health Policy and Management University of Arkansas for Medical Sciences (UAMS) Fayetteville Arkansas USA.

Department of Biomedical Informatics University of Arkansas for Medical Sciences (UAMS) Fayetteville Arkansas USA.

出版信息

Learn Health Syst. 2023 Oct 5;7(4):e10396. doi: 10.1002/lrh2.10396. eCollection 2023 Oct.

DOI:10.1002/lrh2.10396
PMID:37860055
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10582207/
Abstract

Computable biomedical knowledge artifacts (CBKs) are software programs that transform input data into practical output. CBKs are expected to play a critical role in the future of learning health systems. While there has been rapid growth in the development of CBKs, broad adoption is hampered by limited verification, documentation, and dissemination channels. To address these issues, the Learning Health Systems journal created a track dedicated to publishing CBKs through a peer-review process. Peer review of CBKs should improve reproducibility, reuse, trust, and recognition in biomedical fields, contributing to learning health systems. This special issue introduces the CBK track with four manuscripts reporting a functioning CBK, and another four manuscripts tackling methodological, policy, deployment, and platform issues related to fostering a healthy ecosystem for CBKs. It is our hope that the potential of CBKs exemplified and highlighted by these quality publications will encourage scientists within learning health systems and related biomedical fields to engage with this new form of scientific discourse.

摘要

可计算生物医学知识工件(CBK)是将输入数据转换为实际输出的软件程序。预计CBK将在学习型健康系统的未来发挥关键作用。虽然CBK的开发一直在迅速增长,但广泛采用受到验证、文档和传播渠道有限的阻碍。为了解决这些问题,《学习健康系统》杂志设立了一个专栏,专门通过同行评审过程发表CBK。对CBK的同行评审应提高生物医学领域的可重复性、可重用性、可信度和认可度,为学习型健康系统做出贡献。本期特刊通过四篇报告功能正常的CBK的手稿以及另外四篇解决与促进CBK健康生态系统相关的方法、政策、部署和平台问题的手稿介绍了CBK专栏。我们希望这些高质量出版物所例证和突出的CBK的潜力将鼓励学习型健康系统和相关生物医学领域的科学家参与这种新的科学话语形式。

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本文引用的文献

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Immunization calculation engine: An open source immunization evaluation and forecasting system.免疫计算引擎:一个开源的免疫评估与预测系统。
Learn Health Syst. 2021 Jul 7;6(1):e10285. doi: 10.1002/lrh2.10285. eCollection 2022 Jan.
2
Categorizing metadata to help mobilize computable biomedical knowledge.对元数据进行分类以助力调动可计算的生物医学知识。
Learn Health Syst. 2021 May 9;6(1):e10271. doi: 10.1002/lrh2.10271. eCollection 2022 Jan.
3
Computable knowledge: An imperative for Learning Health Systems.可计算知识:学习型健康系统的一项必要条件。
Learn Health Syst. 2019 Oct 6;3(4):e10203. doi: 10.1002/lrh2.10203. eCollection 2019 Oct.
4
Ethical, legal, and social implications of learning health systems.学习型健康系统的伦理、法律和社会影响
Learn Health Syst. 2018 Jan 3;2(1):e10051. doi: 10.1002/lrh2.10051. eCollection 2018 Jan.
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Opinion: Is science really facing a reproducibility crisis, and do we need it to?观点:科学真的面临可重复性危机了吗?我们需要解决它吗?
Proc Natl Acad Sci U S A. 2018 Mar 13;115(11):2628-2631. doi: 10.1073/pnas.1708272114.
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1,500 scientists lift the lid on reproducibility.1500名科学家揭开了可重复性的盖子。
Nature. 2016 May 26;533(7604):452-4. doi: 10.1038/533452a.
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The FAIR Guiding Principles for scientific data management and stewardship.科学数据管理和保存的 FAIR 指导原则。
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A survey of quality assurance practices in biomedical open source software projects.生物医学开源软件项目中的质量保证实践调查。
J Med Internet Res. 2007 May 7;9(2):e8. doi: 10.2196/jmir.9.2.e8.