College of Veterinary Medicine, Nanjing Agricultural University , Nanjing, China.
OIE Reference Lab for Swine Streptococcosis , Nanjing, China.
Appl Environ Microbiol. 2023 Nov 29;89(11):e0128423. doi: 10.1128/aem.01284-23. Epub 2023 Oct 20.
To the best of our knowledge, this study reveals a strong correlation between mass spectra pattern and virulence phenotype among for the first time. In order to make the findings applicable and to excavate the intrinsic information in the spectra, the classifiers based on the machine learning algorithms were established, and RF (Random Forest)-based models have achieved an accuracy of over 90%. Overall, this study will pave the way for virulent SS2 ( serotype 2) rapid detection, and the important findings on the association between genotype and mass spectrum may provide a new idea for the genotype-dependent detection of specific pathogens.
据我们所知,这项研究首次揭示了在 之间,质荷比图谱模式与毒力表型之间存在很强的相关性。为了使研究结果具有实际应用价值并挖掘谱图中的内在信息,我们建立了基于机器学习算法的分类器,其中基于随机森林(RF)的模型的准确率超过 90%。总的来说,这项研究将为 SS2(血清型 2)的快速检测铺平道路,而关于基因型与质荷比之间关联的重要发现可能为基于基因型的特定病原体检测提供新的思路。