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网络动力学方法研究(印度醋栗)中作为天然 BACE1 抑制剂的关键植物化学成分:一项研究。

Networkodynamic approach to perceive the key phytoconstituents of (Amla) as natural BACE1 inhibitors: an study.

机构信息

Department of Medicinal Chemistry, National Institute of Pharmaceutical Education and Research, Raebareli, Lucknow, Uttar Pradesh, India.

Department of Pharmacology and Toxicology, National Institute of Pharmaceutical Education and Research, Raebareli, Lucknow, Uttar Pradesh, India.

出版信息

J Biomol Struct Dyn. 2024;42(22):12304-12316. doi: 10.1080/07391102.2023.2269260. Epub 2023 Oct 20.

Abstract

Alzheimer's disease (AD) is a deteriorating neural disorder, and currently, available drugs are ineffective in its treatment. (Amla) is widely recognised in the Indian medicinal system for ameliorative effects in managing diabetes, hyperlipidaemia and neurological diseases. Thus, we aimed to identify the active phytoconstituents of and their role in inhibiting the potential targets for the possible treatment of AD. The network pharmacology approach, gene ontology, molecular docking and molecular dynamics simulation (MDS) studies were performed. A total of 36 bioactive components in , 95 predicted anti-AD targets, and 3398 AD-related targets were identified from different databases. The network analysis showed that BACE1, ABCB1 and AChE, CA2 are the most potential AD targets. Based on gene ontology and topology analysis results, BACE1 was a significant target related to AD pathways, and quercetin, kaempferol and myricetin showed the highest interaction with target genes. The molecular docking results found that rutin and quercetin displayed better binding affinities -7.5, -5.67 kcal/mol than the BACE1 bound internal ligand. Furthermore, MDS results suggested that quercetin and rutin could be potential inhibitors against BACE-1 protein and may have therapeutic effects in treating AD. Such promising results could be further helpful in new drug discovery against AD.Communicated by Ramaswamy H. Sarma.

摘要

阿尔茨海默病(AD)是一种进行性神经紊乱疾病,目前可用的药物在治疗方面效果不佳。(印度醋栗)在印度医学体系中被广泛认可,具有改善糖尿病、高脂血症和神经疾病的作用。因此,我们旨在确定 的有效植物成分及其在抑制 AD 潜在靶点方面的作用,以寻找 AD 的可能治疗方法。采用网络药理学方法、基因本体论、分子对接和分子动力学模拟(MDS)研究。从不同的数据库中总共鉴定出 中的 36 种生物活性成分、95 个预测的抗 AD 靶点和 3398 个 AD 相关靶点。网络分析表明,BACE1、ABCB1 和 AChE、CA2 是最有潜力的 AD 靶点。基于基因本体论和拓扑分析结果,BACE1 是与 AD 途径相关的重要靶点,槲皮素、山奈酚和杨梅素与靶基因的相互作用最高。分子对接结果发现芦丁和槲皮素与 BACE1 结合的内配体的结合亲和力分别为-7.5、-5.67 kcal/mol,优于 BACE1。此外,MDS 结果表明,槲皮素和芦丁可能是 BACE-1 蛋白的潜在抑制剂,并可能对 AD 的治疗有疗效。这些有希望的结果可能有助于针对 AD 的新药发现。

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