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一个新的 22-bp 缺失 within 基因与山羊生长性状显著相关。

A novel 22-bp InDel within gene is significantly associated with growth traits in goat.

机构信息

Fujian Academy of Agricultural Sciences, Fuzhou, Fujian, China.

College of Animal Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.

出版信息

Anim Biotechnol. 2024 Nov;35(1):2262537. doi: 10.1080/10495398.2023.2262537. Epub 2023 Oct 23.

Abstract

Fibroblast growth factor 7 (FGF7) is involved in lipid metabolism, which is considered as a candidate gene with close relation with muscle development by eGWAs and RNA-Seq analyses. To date, limited research has been conducted on the relationship between gene and growth traits. The main objective of this work was to further investigate the association between novel InDel within gene and growth traits in goat. Herein, mRNA expression levels were investigated in various Fuqing goat tissues. We found that gene was expressed in six adult goat tissues with the highest mRNA levels in adipose tissue. This result suggested that gene might play a critical role in fat deposition. We also detected potential polymorphisms in Fuqing, Nubian and Jianyang Daer breeds. A 22-bp InDel polymorphism in gene was detected in 396 goats and the three genotypes were designated as II, ID, and DD. Correlation analysis revealed that InDel polymorphism was significantly associated with growth traits ( < 0.05). Goats with genotypes ID and/or II had superior growth traits compared to those with genotype DD. In summary, our findings suggested that the 22-bp InDel within gene could act as a molecular marker to improve the growth traits of goats in breeding programs.

摘要

成纤维细胞生长因子 7(FGF7)参与脂质代谢,通过 eGWAs 和 RNA-Seq 分析,它被认为是与肌肉发育密切相关的候选基因。迄今为止,关于基因与生长性状之间关系的研究还很有限。本研究的主要目的是进一步研究山羊基因内新的 InDel 与生长性状之间的关系。在此,我们研究了不同福清山羊组织中mRNA 的表达水平。我们发现基因在六种成年山羊组织中表达,在脂肪组织中的 mRNA 水平最高。这一结果表明,基因可能在脂肪沉积中发挥关键作用。我们还在福清、努比亚和建阳大耳三个品种中检测到了潜在的多态性。在 396 只山羊中检测到基因中的 22-bp InDel 多态性,三种基因型分别命名为 II、ID 和 DD。相关性分析表明,InDel 多态性与生长性状显著相关(<0.05)。基因型为 ID 和/或 II 的山羊的生长性状优于基因型为 DD 的山羊。总之,我们的研究结果表明,基因内的 22-bp InDel 可以作为一个分子标记,用于提高育种计划中山羊的生长性状。

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