Xu Wenqiang, Ren Yajing, Xia Yuxiao, Liu Lin, Meng Xiangfeng, Chen Guanjun, Zhang Weixin, Liu Weifeng
State Key Laboratory of Microbial Technology, Shandong University, No.72 Binhai Road, Qingdao, 266237, People's Republic of China.
Shandong Lishan Biotechnology Co., LTD, Jinan, China.
Biotechnol Biofuels Bioprod. 2023 Oct 27;16(1):161. doi: 10.1186/s13068-023-02417-w.
The well-known industrial fungus Trichoderma reesei has an excellent capability of secreting a large amount of cellulases and xylanases. The induced expression of cellulase and xylanase genes is tightly controlled at the transcriptional level. However, compared to the intensive studies on the intricate regulatory mechanism of cellulase genes, efforts to understand how xylanase genes are regulated are relatively limited, which impedes the further improvement of xylanase production by T. reesei via rational strain engineering.
To identify transcription factors involved in regulating xylanase gene expression in T. reesei, yeast one-hybrid screen was performed based on the promoters of two major extracellular xylanase genes xyn1 and xyn2. A putative transcription factor named XTR1 showing significant binding capability to the xyn1 promoter but not that of xyn2, was successfully isolated. Deletion of xtr1 significantly increased the transcriptional level of xyn1, but only exerted a minor promoting effect on that of xyn2. The xylanase activity was increased by ~ 50% with XTR1 elimination but the cellulase activity was hardly affected. Subcellular localization analysis of XTR1 fused to a green fluorescence protein demonstrated that XTR1 is a nuclear protein. Further analyses revealed the precise binding site of XTR1 and nucleotides critical for the binding within the xyn1 promoter. Moreover, competitive EMSAs indicated that XTR1 competes with the essential transactivator XYR1 for binding to the xyn1 promoter.
XTR1 represents a new transcriptional repressor specific for controlling xylanase gene expression. Isolation and functional characterization of this new factor not only contribute to further understanding the stringent regulatory network of xylanase genes, but also provide important clues for boosting xylanase biosynthesis in T. reesei.
著名的工业真菌里氏木霉具有出色的分泌大量纤维素酶和木聚糖酶的能力。纤维素酶和木聚糖酶基因的诱导表达在转录水平上受到严格控制。然而,与对纤维素酶基因复杂调控机制的深入研究相比,了解木聚糖酶基因如何被调控的努力相对有限,这阻碍了通过合理的菌株工程进一步提高里氏木霉的木聚糖酶产量。
为了鉴定参与调控里氏木霉木聚糖酶基因表达的转录因子,基于两个主要的细胞外木聚糖酶基因xyn1和xyn2的启动子进行了酵母单杂交筛选。成功分离出一个名为XTR1的假定转录因子,它对xyn1启动子具有显著的结合能力,但对xyn2启动子没有。缺失xtr1显著提高了xyn1的转录水平,但对xyn2的转录水平仅产生轻微的促进作用。消除XTR1后木聚糖酶活性提高了约50%,但纤维素酶活性几乎不受影响。对与绿色荧光蛋白融合的XTR1进行亚细胞定位分析表明,XTR1是一种核蛋白。进一步分析揭示了XTR在xyn1启动子内的精确结合位点和对结合至关重要的核苷酸。此外,竞争性电泳迁移率变动分析表明,XTR1与必需的反式激活因子XYR1竞争结合xyn1启动子。
XTR1代表一种新的特异性转录抑制因子,用于控制木聚糖酶基因的表达。这个新因子的分离和功能表征不仅有助于进一步了解木聚糖酶基因的严格调控网络,也为提高里氏木霉中木聚糖酶的生物合成提供了重要线索。