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表观转录组学作为骨骼肌基因表达调控的新层次:已知功能与未来展望。

Epitranscriptomics as a New Layer of Regulation of Gene Expression in Skeletal Muscle: Known Functions and Future Perspectives.

机构信息

Department of Life Sciences, University of Modena and Reggio Emilia, 41125 Modena, Italy.

Institute of Nanotechnology, National Research Council (CNR-NANOTEC), University of Rome "La Sapienza", 00181 Rome, Italy.

出版信息

Int J Mol Sci. 2023 Oct 13;24(20):15161. doi: 10.3390/ijms242015161.

Abstract

Epitranscriptomics refers to post-transcriptional regulation of gene expression via RNA modifications and editing that affect RNA functions. Many kinds of modifications of mRNA have been described, among which are N6-methyladenosine (m6A), N1-methyladenosine (m1A), 7-methylguanosine (m7G), pseudouridine (), and 5-methylcytidine (m5C). They alter mRNA structure and consequently stability, localization and translation efficiency. Perturbation of the epitranscriptome is associated with human diseases, thus opening the opportunity for potential manipulations as a therapeutic approach. In this review, we aim to provide an overview of the functional roles of epitranscriptomic marks in the skeletal muscle system, in particular in embryonic myogenesis, muscle cell differentiation and muscle homeostasis processes. Further, we explored high-throughput epitranscriptome sequencing data to identify RNA chemical modifications in muscle-specific genes and we discuss the possible functional role and the potential therapeutic applications.

摘要

表观转录组学是指通过影响 RNA 功能的 RNA 修饰和编辑来对基因表达进行转录后调控。已经描述了许多种 mRNA 的修饰,其中包括 N6-甲基腺苷(m6A)、N1-甲基腺苷(m1A)、7-甲基鸟苷(m7G)、假尿嘧啶()和 5-甲基胞嘧啶(m5C)。它们改变了 mRNA 的结构,进而影响其稳定性、定位和翻译效率。表观转录组的紊乱与人类疾病有关,因此为潜在的治疗方法提供了操作的机会。在这篇综述中,我们旨在概述表观转录组标记在骨骼肌系统中的功能作用,特别是在胚胎肌发生、肌肉细胞分化和肌肉稳态过程中的作用。此外,我们还探索了高通量的表观转录组测序数据,以鉴定肌肉特异性基因中的 RNA 化学修饰,并讨论了其可能的功能作用和潜在的治疗应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68bf/10606696/ea22380700b8/ijms-24-15161-g001.jpg

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