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蜈蚣草在不同非生物胁迫下 RT-qPCR 基因表达分析中合适内参基因的选择。

Selection of Suitable Reference Genes for RT-qPCR Gene Expression Analysis in Centipedegrass under Different Abiotic Stress.

机构信息

College of Grassland Science and Technology, Sichuan Agricultural University, Wenjiang, Chengdu 611130, China.

Sichuan Academy of Grassland Sciences, Pidu, Chengdu 611731, China.

出版信息

Genes (Basel). 2023 Sep 26;14(10):1874. doi: 10.3390/genes14101874.

Abstract

As a C4 warm-season turfgrass, centipedegrass ( (Munro) Hack.) is known for its exceptional resilience to intensive maintenance practices. In this research, the most stably expressed reference genes in the leaves of centipedegrass under different stress treatments, including salt, cold, drought, aluminum (Al), and herbicide, were screened by the quantitative real-time PCR (RT-qPCR) technique. The stability of 13 candidate reference genes was evaluated by software GeNorm V3.4, NormFinder V20, BestKeeper V1.0, and ReFinder V1.0. The results of this experiment demonstrated that the expression of the () remained the most stable under cold and Al stress conditions. On the other hand, the () gene exhibited the best performance in leaf tissues subjected to salt and drought stresses. Under herbicide stress, the expression level of the () gene ranked the highest. The expression levels of abiotic stress-associated genes such as , , , , and were assessed to validate the reliability of the selected reference genes. This study provides valuable information and reference points for gene expression under abiotic stress conditions in centipedegrass.

摘要

作为一种 C4 暖季型草坪草,蜈蚣草((Munro) Hack.)以其对密集维护措施的出色弹性而闻名。在这项研究中,通过定量实时 PCR(RT-qPCR)技术筛选了蜈蚣草叶片在不同胁迫处理下(包括盐、冷、干旱、铝(Al)和除草剂)最稳定表达的参考基因。通过 GeNorm V3.4、NormFinder V20、BestKeeper V1.0 和 ReFinder V1.0 软件评估了 13 个候选参考基因的稳定性。实验结果表明,在冷和 Al 胁迫条件下,()的表达最为稳定。另一方面,()基因在盐和干旱胁迫下的叶片组织中表现最佳。在除草剂胁迫下,()基因的表达水平最高。评估了与非生物胁迫相关的基因(例如 、 、 、 和 )的表达水平,以验证所选参考基因的可靠性。这项研究为蜈蚣草在非生物胁迫条件下的基因表达提供了有价值的信息和参考点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/08ed/10606319/0b7583363e26/genes-14-01874-g001.jpg

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