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细胞外囊泡和噬菌体:环境生物胶体研究的新方向。

Extracellular Vesicles and Bacteriophages: New Directions in Environmental Biocolloid Research.

机构信息

Department of Civil & Environmental Engineering, Duke University, Durham, North Carolina 27708, United States.

Center for the Environmental Implications of Nanotechnology, Duke University, Durham, North Carolina 27708, United States.

出版信息

Environ Sci Technol. 2023 Nov 7;57(44):16728-16742. doi: 10.1021/acs.est.3c05041. Epub 2023 Oct 29.

DOI:10.1021/acs.est.3c05041
PMID:37898880
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11623402/
Abstract

There is a long-standing appreciation among environmental engineers and scientists regarding the importance of biologically derived colloidal particles and their environmental fate. This interest has been recently renewed in considering bacteriophages and extracellular vesicles, which are each poised to offer engineers unique insights into fundamental aspects of environmental microbiology and novel approaches for engineering applications, including advances in wastewater treatment and sustainable agricultural practices. Challenges persist due to our limited understanding of interactions between these nanoscale particles with unique surface properties and their local environments. This review considers these biological particles through the lens of colloid science with attention given to their environmental impact and surface properties. We discuss methods developed for the study of inert (nonbiological) particle-particle interactions and the potential to use these to advance our understanding of the environmental fate and transport of extracellular vesicles and bacteriophages.

摘要

在环境工程师和科学家中间,一直以来都高度重视生物衍生胶体颗粒及其环境归宿的重要性。在考虑噬菌体和细胞外囊泡时,这种兴趣最近又重新出现了,因为它们都有可能为工程师提供对环境微生物学基本方面的独特见解,并为工程应用提供新的方法,包括废水处理和可持续农业实践的进步。由于我们对这些具有独特表面性质的纳米级颗粒与局部环境之间的相互作用的了解有限,因此仍然存在挑战。本综述通过胶体科学的视角来考虑这些生物颗粒,重点关注它们的环境影响和表面性质。我们讨论了用于研究惰性(非生物)颗粒-颗粒相互作用的方法,以及利用这些方法来提高我们对细胞外囊泡和噬菌体的环境归宿和迁移的理解的潜力。

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本文引用的文献

1
Characterizing the Transport and Surface Affinity of Extracellular Vesicles Isolated from Yeast and Bacteria in Well-Characterized Porous Media.表征从酵母和细菌中分离的外泌体在特征明确的多孔介质中的传输和表面亲和力。
Environ Sci Technol. 2023 Sep 5;57(35):13182-13192. doi: 10.1021/acs.est.3c03700. Epub 2023 Aug 22.
2
Characterization of membrane vesicles in indicates potential roles in their copiotrophic lifestyle.对膜泡的表征表明其在富营养性生活方式中具有潜在作用。
Microlife. 2022 Dec 20;4:uqac025. doi: 10.1093/femsml/uqac025. eCollection 2023.
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Environmental and Taxonomic Drivers of Bacterial Extracellular Vesicle Production in Marine Ecosystems.
环境和分类学因素对海洋生态系统中细菌胞外囊泡产生的影响。
Appl Environ Microbiol. 2023 Jun 28;89(6):e0059423. doi: 10.1128/aem.00594-23. Epub 2023 May 18.
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Composition and functions of bacterial membrane vesicles.细菌膜泡的组成和功能。
Nat Rev Microbiol. 2023 Jul;21(7):415-430. doi: 10.1038/s41579-023-00875-5. Epub 2023 Mar 17.
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Comparative electrokinetic properties of extracellular vesicles produced by yeast and bacteria.酵母和细菌产生的细胞外囊泡的比较电泳动力学特性。
Colloids Surf B Biointerfaces. 2023 May;225:113249. doi: 10.1016/j.colsurfb.2023.113249. Epub 2023 Mar 6.
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Bacterial outer membrane vesicles induce a transcriptional shift in arabidopsis towards immune system activation leading to suppression of pathogen growth in planta.细菌外膜囊泡诱导拟南芥向免疫系统激活的转录重编程,从而抑制病原菌在植物体内的生长。
J Extracell Vesicles. 2023 Jan;12(1):e12285. doi: 10.1002/jev2.12285.
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Prediction of attachment efficiency using machine learning on a comprehensive database and its validation.利用综合数据库通过机器学习预测附着效率及其验证
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Outer Membrane Vesicles as Mediators of Plant-Bacterial Interactions.外膜囊泡作为植物与细菌相互作用的介质
Front Microbiol. 2022 Jun 1;13:902181. doi: 10.3389/fmicb.2022.902181. eCollection 2022.
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A new horizon of precision medicine: combination of the microbiome and extracellular vesicles.精准医学的新视野:微生物组与细胞外囊泡的结合。
Exp Mol Med. 2022 Apr;54(4):466-482. doi: 10.1038/s12276-022-00748-6. Epub 2022 Apr 22.
10
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Environ Sci Technol. 2022 May 3;56(9):5653-5663. doi: 10.1021/acs.est.1c08654. Epub 2022 Apr 19.