Zoller Julian, Trajanova Despina, Feurstein Simone
Department of Internal Medicine, Section of Hematology, Oncology & Rheumatology, University Hospital Heidelberg, Heidelberg, Germany.
Front Oncol. 2023 Oct 13;13:1205855. doi: 10.3389/fonc.2023.1205855. eCollection 2023.
Inherited hematologic malignancies are linked to a heterogenous group of genes, knowledge of which is rapidly expanding using panel-based next-generation sequencing (NGS) or whole-exome/whole-genome sequencing. Importantly, the penetrance for these syndromes is incomplete, and disease development, progression or transformation has critical clinical implications. With the earlier detection of healthy carriers and sequential monitoring of these patients, clonal hematopoiesis and somatic driver variants become significant factors in determining disease transformation/progression and timing of (preemptive) hematopoietic stem cell transplant in these patients. In this review, we shed light on the detection of probable germline predisposition alleles based on diagnostic/prognostic 'somatic' NGS panels. A multi-tier approach including variant allele frequency, bi-allelic inactivation, persistence of a variant upon clinical remission and mutational burden can indicate variants with high pre-test probability. We also discuss the shared underlying biology and frequency of germline and somatic variants affecting the same gene, specifically focusing on variants in , , and . Germline variants in these genes are associated with a (specific) pattern or over-/underrepresentation of somatic molecular or cytogenetic alterations that may help identify the underlying germline syndrome and predict the course of disease in these individuals. This review is based on the current knowledge about somatic drivers in these four syndromes by integrating data from all published patients, thereby providing clinicians with valuable and concise information.
遗传性血液系统恶性肿瘤与一组异质性基因相关,利用基于基因 panel 的二代测序(NGS)或全外显子组/全基因组测序,我们对这些基因的了解正在迅速扩展。重要的是,这些综合征的外显率并不完全,疾病的发生、进展或转化具有关键的临床意义。随着健康携带者的早期检测以及对这些患者的连续监测,克隆性造血和体细胞驱动变异成为决定这些患者疾病转化/进展以及(预防性)造血干细胞移植时机的重要因素。在这篇综述中,我们基于诊断/预后性“体细胞”NGS 基因 panel 来阐明可能的种系易感性等位基因的检测。一种包括变异等位基因频率、双等位基因失活、临床缓解后变异的持续存在以及突变负荷的多层方法,可以指示具有高检测前概率的变异。我们还讨论了影响同一基因的种系和体细胞变异的共同潜在生物学特性和频率,特别关注了[具体基因 1]、[具体基因 2]、[具体基因 3]和[具体基因 4]中的变异。这些基因中的种系变异与体细胞分子或细胞遗传学改变的(特定)模式或过度/代表性不足相关,这可能有助于识别潜在的种系综合征并预测这些个体的疾病进程。这篇综述整合了所有已发表患者的数据,基于目前对这四种综合征中体细胞驱动因素的了解,从而为临床医生提供有价值且简洁的信息。