Department of Burn and Plastic Surgery, Affiliated Hospital of Nantong University, Nantong, China.
Nantong University, Nantong, China.
Eur J Med Res. 2023 Nov 2;28(1):476. doi: 10.1186/s40001-023-01421-y.
Keloid formation is a pathological consequence resulting from cutaneous irritation and injury, primarily attributed to excessive collagen matrix deposition and fibrous tissue proliferation. Chronic inflammation, left uncontrolled over an extended period, also stands as a substantial contributing factor. The precise mechanisms underlying keloid formation remain unclear. Therefore, this study aimed to identify key genes for diagnostic purposes. To achieve this, we used two Gene Expression Omnibus (GEO) data sets to identify differentially expressed genes. We identified one particular gene, homeobox C9 (HOXC9), using a thorough strategy involving two algorithms (least absolute shrinkage and selection operator and support vector machine-recursive feature elimination) and weighted gene co-expression network analysis. We then assessed its expression in normal and keloid tissues. In addition, we explored its temporal expression patterns via Mfuzz time clustering analysis. In our comprehensive analysis, we observed that immune infiltration, as well as cell proliferation, are crucial to keloid formation. Thus, we investigated immune cell infiltration in the keloid and normal groups, as well as the correlation between HOXC9 and these immune cells. It was found that HOXC9 was closely associated with the immune microenvironment of keloids. This shows that HOXC9 can serve as a potential biomarker and therapeutic target for keloids.
瘢痕疙瘩的形成是皮肤刺激和损伤的一种病理性后果,主要归因于胶原基质的过度沉积和纤维组织的增殖。慢性炎症在较长时间内得不到控制,也是一个重要的促成因素。瘢痕疙瘩形成的确切机制尚不清楚。因此,本研究旨在寻找用于诊断目的的关键基因。为了实现这一目标,我们使用了两个基因表达综合数据集(GEO)来识别差异表达的基因。我们使用了两种算法(最小绝对收缩和选择算子和支持向量机递归特征消除)和加权基因共表达网络分析,通过一种彻底的策略来识别一个特定的基因,同源盒 C9(HOXC9)。然后,我们评估了其在正常和瘢痕疙瘩组织中的表达。此外,我们通过 Mfuzz 时间聚类分析探索了其时间表达模式。在我们的综合分析中,我们观察到免疫浸润以及细胞增殖对瘢痕疙瘩的形成至关重要。因此,我们研究了瘢痕疙瘩和正常组中的免疫细胞浸润,以及 HOXC9 与这些免疫细胞之间的相关性。结果发现,HOXC9 与瘢痕疙瘩的免疫微环境密切相关。这表明 HOXC9 可以作为瘢痕疙瘩的潜在生物标志物和治疗靶点。