Faculty of Global Human Sciences, Kobe University, 3-11 Tsurukabuto, Nada-ku, Kobe 657-8501, Japan.
Graduate School of Human Development and Environment, Kobe University, 3-11 Tsurukabuto, Nada-ku, Kobe 657-8501, Japan.
Int J Mol Sci. 2023 Nov 6;24(21):16009. doi: 10.3390/ijms242116009.
Globins have been studied as model proteins to elucidate the principles of protein evolution. This was achieved by understanding the relationship between amino acid sequence, three-dimensional structure, physicochemical properties, and physiological function. Previous molecular phylogenies of chordate globin genes revealed the monophyletic evolution of urochordate globins and suggested convergent evolution. However, to provide evidence of convergent evolution, it is necessary to determine the physicochemical and functional similarities between vertebrates and urochordate globins. In this study, we determined the expression patterns of globin genes using real-time RT-PCR. Two genes (Gb-1 and Gb-2) were predominantly expressed in the branchial sac, heart, and hemocytes and were induced under hypoxia. Combined with the sequence analysis, our findings suggest that Gb-1/-2 correspond to vertebrate hemoglobin-α/-β. However, we did not find a robust similarity between Gb-3, Gb-4, and vertebrate globins. These results suggested that, even though globins obtained their unique functions differently from vertebrate globins, the two of them shared some physicochemical features and physiological functions. Our findings offer a good example for understanding the molecular mechanisms underlying gene co-option and convergence, which could lead to evolutionary innovations.
球蛋白一直被作为模型蛋白来阐明蛋白质进化的原理。通过理解氨基酸序列、三维结构、物理化学性质和生理功能之间的关系,实现了这一目标。先前的脊索动物球蛋白基因的分子系统发生学揭示了尾索动物球蛋白的单系进化,并表明了趋同进化。然而,为了提供趋同进化的证据,有必要确定脊椎动物和尾索动物球蛋白之间的物理化学和功能相似性。在这项研究中,我们使用实时 RT-PCR 确定了球蛋白基因的表达模式。两个基因(Gb-1 和 Gb-2)在鳃囊、心脏和血细胞中优先表达,并在缺氧下诱导表达。结合序列分析,我们的发现表明 Gb-1/-2 对应于脊椎动物血红蛋白-α/-β。然而,我们没有发现 Gb-3 和 Gb-4 与脊椎动物球蛋白之间存在强大的相似性。这些结果表明,尽管球蛋白从脊椎动物球蛋白中获得了不同的独特功能,但它们具有一些物理化学特征和生理功能。我们的研究结果为理解基因共适应和趋同的分子机制提供了一个很好的例子,这可能导致进化创新。