Suppr超能文献

在 Cd 胁迫下,小麦耐镉相关基因的分子特征。

Molecular characterization of genes involved in tolerance of cadmium in Triticum aestivum (L.) under Cd stress.

机构信息

Department of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad 38000, Pakistan.

Department of Biology, College of Science, Princess Nourah bint Abdulrahman University, P.O. Box 84428, Riyadh 11671, Saudi Arabia.

出版信息

J Hazard Mater. 2024 Feb 15;464:132955. doi: 10.1016/j.jhazmat.2023.132955. Epub 2023 Nov 10.

Abstract

The NRAMPs (natural resistance-associated macrophage proteins) are major transporters for the absorption and transport of metals like Pb, Zn, Mn, Fe, and Cd in plants. While NRAMP gene family members have been extensively studied as metal transporters in model and other plants, little information has been reported on their role in Triticum aestivum, particularly in response to Cd stress. Current study reported 13 NRAMP candidates in the genome of T. aestivum. Phylogenetic analysis divided these into three clades. Motif and gene structure study showed that members in the same clades shared the same location and pattern, which further supported the phylogenetic analysis. The analysis of cis-acting elements in promoter sequences of NRAMP genes in wheat identified stress-responsive transcription factor binding sites. Multiple sequence alignment identified the conservation of important residues. Based on RNA-seq and qRT-PCR analysis, Cd stress-responsive variations of TaNRAMP gene expression were reported. This study provides comprehensive data to understand the TaNRAMP gene family, its features, and its expression, which will be a helpful framework for functional research.

摘要

NRAMPs(天然抗性相关巨噬细胞蛋白)是植物吸收和转运 Pb、Zn、Mn、Fe 和 Cd 等金属的主要转运蛋白。虽然 NRAMP 基因家族成员已被广泛研究为模型和其他植物中的金属转运蛋白,但关于它们在小麦(Triticum aestivum)中的作用,特别是在应对 Cd 胁迫方面的信息却很少。本研究在小麦基因组中鉴定到 13 个 NRAMP 候选基因。系统发育分析将这些基因分为三个分支。基序和基因结构研究表明,同一分支中的成员具有相同的位置和模式,这进一步支持了系统发育分析。对小麦 NRAMP 基因启动子序列中顺式作用元件的分析鉴定出了应激响应转录因子结合位点。多重序列比对确定了重要残基的保守性。基于 RNA-seq 和 qRT-PCR 分析,报告了 Cd 胁迫响应的 TaNRAMP 基因表达变化。本研究提供了全面的数据来了解 TaNRAMP 基因家族及其特征和表达,这将为功能研究提供一个有帮助的框架。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验