Su Beibei, Li Ziwei, Liu Hongli, Niu Xiaoyun, Zhao Xiaojie, Wu Yumeng, Wang Qian, Yuan Yangchen, Xiao Zhuolin, Huang Dazhuang
College of Landscape Architecture and Tourism, Hebei Agricultural University, Baoding, 071000, China.
Shijiazhuang Information Engineering Vocational College, Shijiazhuang, 052161, China.
Heliyon. 2024 Aug 24;10(17):e36923. doi: 10.1016/j.heliyon.2024.e36923. eCollection 2024 Sep 15.
is a widely used ornamental garden and important medicinal plant. Our previous studies have shown that it exhibits significant uptake and translocation capacity under Cd stress compared to other species. Gene expression is studied using RT-qPCR; however, there are no reference genes have been found for under Cd stress. In this investigation, thirteen possible reference genes from previous studies and our transcriptome were screened using RT-qPCR in the leaves and roots of Cd-stressed plants. The findings revealed that and were the best reference genes for roots with and without Cd stress, whereas and were the best reference genes for leaves. Among the different tissues without Cd stress, and exhibited the best results, whereas and exhibited the best results under Cd stress. The most stable reference genes in the leaves and roots were and , respectively, under and without Cd stress, and was the most unstable. Finally, three metal ion response genes, , and were detected using RT-qPCR and compared with the transcriptome data to further confirm the reliability of the chosen genes. This study identified suitable reference genes for under Cd-stress conditions.
是一种广泛应用于园林的观赏植物和重要的药用植物。我们之前的研究表明,与其他物种相比,它在镉胁迫下表现出显著的吸收和转运能力。使用RT-qPCR研究基因表达;然而,在镉胁迫下尚未发现用于的内参基因。在本研究中,利用RT-qPCR在镉胁迫植物的叶片和根中筛选了先前研究和我们转录组中的13个可能的内参基因。结果表明,和是镉胁迫和非镉胁迫条件下根的最佳内参基因,而和是叶片的最佳内参基因。在无镉胁迫的不同组织中,和表现出最佳结果,而在镉胁迫下和表现出最佳结果。在有镉胁迫和无镉胁迫条件下,叶片和根中最稳定的内参基因分别是和,最不稳定的是。最后,使用RT-qPCR检测了三个金属离子响应基因、和,并与转录组数据进行比较,以进一步确认所选基因的可靠性。本研究确定了镉胁迫条件下的合适内参基因。