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5S RNA的核糖核酸酶抗性区域及其与蛋白质L18和L25的RNA结合位点的关系。

A ribonuclease-resistant region of 5S RNA and its relation to the RNA binding sites of proteins L18 and L25.

作者信息

Douthwaite S, Garrett R A, Wagner R, Feunteun J

出版信息

Nucleic Acids Res. 1979 Jun 11;6(7):2453-70. doi: 10.1093/nar/6.7.2453.

DOI:10.1093/nar/6.7.2453
PMID:379819
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC327865/
Abstract

An RNA fragment, constituting three subfragments of nucleotide sequences 1-11, 69-87 and 89-120, is the most ribonuclease-resistant part of the native 5S RNA of Escherichia coli, at 0 degrees C. A smaller fragment of nucleotide sequence 69-87 and 90-110 is ribonuclease-resistant at 25 degrees. Degradation of the L25-5S RNA complex with ribonuclease A or T2 yielded RNA fragments similar to those of the free 5S RNA at 0 degrees C and 25 degrees C; moreover L25 remained strongly bound to both RNA fragments and also produced some opening of the RNA structure in at least two positions. Protein L18 initially protected most of the 5S RNA against ribonuclease digestion, at 0 degrees C, but was then gradually released prior to the formation of the larger RNA fragment. It cannot be concluded, therefore, as it was earlier (Gray et al., 1973), that this RNA fragment contains the primary binding site of L18.

摘要

一个由核苷酸序列1 - 11、69 - 87和89 - 120的三个亚片段组成的RNA片段,在0℃时是大肠杆菌天然5S RNA中最抗核糖核酸酶的部分。核苷酸序列69 - 87和90 - 110的一个较小片段在25℃时抗核糖核酸酶。用核糖核酸酶A或T2降解L25 - 5S RNA复合物,在0℃和25℃时产生的RNA片段与游离5S RNA的片段相似;此外,L25仍与两个RNA片段紧密结合,并且在至少两个位置使RNA结构发生了一些开放。蛋白质L18最初在0℃时保护大部分5S RNA不被核糖核酸酶消化,但在形成较大RNA片段之前逐渐释放。因此,不能像早期(格雷等人,1973年)那样得出结论,即这个RNA片段包含L18的主要结合位点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/e6097bde44a6/nar00448-0093-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/78d9da574d14/nar00448-0085-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/650638156c0f/nar00448-0086-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/09b2a4973cd8/nar00448-0086-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/fa99e2afeb79/nar00448-0087-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/26237e46bd91/nar00448-0089-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/3205ca30023c/nar00448-0089-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/e72c5536309d/nar00448-0092-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/a2db361245f4/nar00448-0093-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/781fee4b8297/nar00448-0093-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/e6097bde44a6/nar00448-0093-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/78d9da574d14/nar00448-0085-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/650638156c0f/nar00448-0086-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/09b2a4973cd8/nar00448-0086-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/fa99e2afeb79/nar00448-0087-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/26237e46bd91/nar00448-0089-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/3205ca30023c/nar00448-0089-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/e72c5536309d/nar00448-0092-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/a2db361245f4/nar00448-0093-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/781fee4b8297/nar00448-0093-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d4c/327865/e6097bde44a6/nar00448-0093-c.jpg

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本文引用的文献

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Degradation of a specific 5 S RNA - 23 S RNA - protein complex by pancreatic ribonuclease.胰腺核糖核酸酶对一种特定的5 S RNA - 23 S RNA - 蛋白质复合物的降解作用
FEBS Lett. 1972 Aug 1;24(2):156-160. doi: 10.1016/0014-5793(72)80756-7.
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Role of 5S RNA in the functions of 50S ribosomal subunits.5S RNA在50S核糖体亚基功能中的作用。
Proc Natl Acad Sci U S A. 1971 Dec;68(12):2932-6. doi: 10.1073/pnas.68.12.2932.
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Ribosomal proteins. Isolation of proteins from 50S ribosomal subunits of Escherichia coli.核糖体蛋白。从大肠杆菌50S核糖体亚基中分离蛋白质。
大肠杆菌核糖体蛋白L25的核磁共振结构显示出与一般应激蛋白和谷氨酰胺-tRNA合成酶的同源性。
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A structural model of 5S RNA from E. coli based on intramolecular crosslinking evidence.基于分子内交联证据构建的大肠杆菌5S RNA结构模型。
Nucleic Acids Res. 1982 Feb 25;10(4):1257-69. doi: 10.1093/nar/10.4.1257.
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A small angle x-ray scattering study of a fragment derived from E. coli 5S RNA.对源自大肠杆菌5S RNA的一个片段进行的小角X射线散射研究。
Nucleic Acids Res. 1984 Feb 24;12(4):2193-203. doi: 10.1093/nar/12.4.2193.
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Proc Natl Acad Sci U S A. 1984 Jan;81(2):322-6. doi: 10.1073/pnas.81.2.322.
7
Structural analyses of E. coli 5S RNA fragments, their associates and complexes with proteins L18 and L25.大肠杆菌5S RNA片段、其与蛋白质L18和L25的缔合物及复合物的结构分析。
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Eur J Biochem. 1972 Jul 24;28(3):412-21. doi: 10.1111/j.1432-1033.1972.tb01927.x.
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J Mol Biol. 1973 Jun 15;77(1):133-52. doi: 10.1016/0022-2836(73)90367-7.
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The identification of the RNA binding site for a 50 S ribosomal protein by a new technique.用新技术鉴定一种50 S核糖体蛋白的RNA结合位点。
FEBS Lett. 1973 Sep 15;35(2):265-72. doi: 10.1016/0014-5793(73)80301-1.
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Mol Gen Genet. 1972;119(4):337-44. doi: 10.1007/BF00272091.
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Mol Gen Genet. 1972;114(2):112-24. doi: 10.1007/BF00332782.