• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基因剂量补偿:起源、鉴定补偿基因的标准以及机制,包括作为癌症中新兴系统水平特性的传感器环。

Gene dosage compensation: Origins, criteria to identify compensated genes, and mechanisms including sensor loops as an emerging systems-level property in cancer.

机构信息

CICICA, Centro de Investigación en Cirugía y Cáncer Research Center on Surgery and Cancer, Universidad de Costa Rica, San José, Costa Rica.

Programa de Doctorado en Ciencias, Sistema de Estudios de Posgrado (SEP), Universidad de Costa Rica, San José, Costa Rica.

出版信息

Cancer Med. 2023 Dec;12(24):22130-22155. doi: 10.1002/cam4.6719. Epub 2023 Nov 21.

DOI:10.1002/cam4.6719
PMID:37987212
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10757140/
Abstract

The gene dosage compensation hypothesis presents a mechanism through which the expression of certain genes is modulated to compensate for differences in the dose of genes when additional chromosomes are present. It is one of the means through which cancer cells actively cope with the potential damaging effects of aneuploidy, a hallmark of most cancers. Dosage compensation arises through several processes, including downregulation or overexpression of specific genes and the relocation of dosage-sensitive genes. In cancer, a majority of compensated genes are generally thought to be regulated at the translational or post-translational level, and include the basic components of a compensation loop, including sensors of gene dosage and modulators of gene expression. Post-translational regulation is mostly undertaken by a general degradation or aggregation of remaining protein subunits of macromolecular complexes. An increasingly important role has also been observed for transcriptional level regulation. This article reviews the process of targeted gene dosage compensation in cancer and other biological conditions, along with the mechanisms by which cells regulate specific genes to restore cellular homeostasis. These mechanisms represent potential targets for the inhibition of dosage compensation of specific genes in aneuploid cancers. This article critically examines the process of targeted gene dosage compensation in cancer and other biological contexts, alongside the criteria for identifying genes subject to dosage compensation and the intricate mechanisms by which cells orchestrate the regulation of specific genes to reinstate cellular homeostasis. Ultimately, our aim is to gain a comprehensive understanding of the intricate nature of a systems-level property. This property hinges upon the kinetic parameters of regulatory motifs, which we have termed "gene dosage sensor loops." These loops have the potential to operate at both the transcriptional and translational levels, thus emerging as promising candidates for the inhibition of dosage compensation in specific genes. Additionally, they represent novel and highly specific therapeutic targets in the context of aneuploid cancer.

摘要

基因剂量补偿假说提出了一种机制,通过该机制,某些基因的表达可以被调节,以补偿额外染色体存在时基因剂量的差异。这是癌细胞积极应对非整倍体潜在破坏性影响的手段之一,非整倍体是大多数癌症的标志。剂量补偿通过几种过程产生,包括特定基因的下调或过表达以及剂量敏感基因的重定位。在癌症中,大多数补偿基因通常被认为是在翻译或翻译后水平上受到调节的,并且包括补偿环的基本组成部分,包括基因剂量的传感器和基因表达的调节剂。翻译后调节主要通过大分子复合物的剩余蛋白质亚基的普遍降解或聚集来进行。转录水平调节也发挥了越来越重要的作用。本文综述了癌症和其他生物条件下靶向基因剂量补偿的过程,以及细胞调节特定基因以恢复细胞内稳态的机制。这些机制代表了抑制非整倍体癌症中特定基因剂量补偿的潜在靶点。本文批判性地检查了癌症和其他生物背景下靶向基因剂量补偿的过程,以及鉴定受剂量补偿影响的基因的标准,以及细胞协调特定基因调节以恢复细胞内稳态的复杂机制。最终,我们的目标是全面了解系统水平特性的复杂性质。该特性取决于调节基序的动力学参数,我们将其称为“基因剂量传感器环”。这些环有可能在转录和翻译水平上发挥作用,因此成为抑制特定基因剂量补偿的有前途的候选物。此外,它们在非整倍体癌症的背景下代表了新的和高度特异性的治疗靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/621f/10757140/31152e3559ff/CAM4-12-22130-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/621f/10757140/b7c38a3e6fcd/CAM4-12-22130-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/621f/10757140/666e9f8ed607/CAM4-12-22130-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/621f/10757140/c99404eb7d6a/CAM4-12-22130-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/621f/10757140/31152e3559ff/CAM4-12-22130-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/621f/10757140/b7c38a3e6fcd/CAM4-12-22130-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/621f/10757140/666e9f8ed607/CAM4-12-22130-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/621f/10757140/c99404eb7d6a/CAM4-12-22130-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/621f/10757140/31152e3559ff/CAM4-12-22130-g001.jpg

相似文献

1
Gene dosage compensation: Origins, criteria to identify compensated genes, and mechanisms including sensor loops as an emerging systems-level property in cancer.基因剂量补偿:起源、鉴定补偿基因的标准以及机制,包括作为癌症中新兴系统水平特性的传感器环。
Cancer Med. 2023 Dec;12(24):22130-22155. doi: 10.1002/cam4.6719. Epub 2023 Nov 21.
2
Extensive protein dosage compensation in aneuploid human cancers.非整倍体人类癌症中的广泛蛋白质剂量补偿。
Genome Res. 2022 Jul;32(7):1254-1270. doi: 10.1101/gr.276378.121. Epub 2022 Jun 14.
3
Dosage-dependent gene regulation in multicellular eukaryotes: implications for dosage compensation, aneuploid syndromes, and quantitative traits.多细胞真核生物中剂量依赖性基因调控:对剂量补偿、非整倍体综合征和数量性状的影响。
Dev Biol. 2001 Jun 15;234(2):275-88. doi: 10.1006/dbio.2001.0262.
4
Post-Translational Dosage Compensation Buffers Genetic Perturbations to Stoichiometry of Protein Complexes.翻译后剂量补偿缓冲了蛋白质复合物化学计量学的遗传扰动。
PLoS Genet. 2017 Jan 25;13(1):e1006554. doi: 10.1371/journal.pgen.1006554. eCollection 2017 Jan.
5
Translational compensation of gene copy number alterations by aneuploidy in Drosophila melanogaster.果蝇中非整倍体对基因拷贝数改变的翻译补偿
Nucleic Acids Res. 2017 Apr 7;45(6):2986-2993. doi: 10.1093/nar/gkx106.
6
Inverse and Proportional Modulation of Gene Expression in Human Aneuploidies.人类非整倍体中基因表达的正反调节。
Genes (Basel). 2024 May 17;15(5):637. doi: 10.3390/genes15050637.
7
Dosage compensation plans: protein aggregation provides additional insurance against aneuploidy.剂量补偿计划:蛋白质聚集为非整倍体提供了额外的保险。
Genes Dev. 2019 Aug 1;33(15-16):1027-1030. doi: 10.1101/gad.329383.119.
8
Dosage compensation and the global re-balancing of aneuploid genomes.剂量补偿与非整倍体基因组的全球再平衡。
Genome Biol. 2010;11(8):216. doi: 10.1186/gb-2010-11-8-216. Epub 2010 Aug 26.
9
Aneuploidy and gene expression: is there dosage compensation?非整倍体和基因表达:是否存在剂量补偿?
Epigenomics. 2019 Dec;11(16):1827-1837. doi: 10.2217/epi-2019-0135. Epub 2019 Nov 22.
10
Dosage compensation can buffer copy-number variation in wild yeast.剂量补偿可缓冲野生酵母中的拷贝数变异。
Elife. 2015 May 8;4:e05462. doi: 10.7554/eLife.05462.

引用本文的文献

1
Expanding the clinical spectrum of PPP3CA variants - alternative isoforms matter.扩展PPP3CA变异体的临床谱——可变剪接异构体很重要。
Orphanet J Rare Dis. 2024 Dec 20;19(1):481. doi: 10.1186/s13023-024-03507-0.
2
High level of aneuploidy and recurrent loss of chromosome 11 as relevant features of somatotroph pituitary tumors.高倍体和 11 号染色体的反复缺失是生长激素细胞垂体肿瘤的重要特征。
J Transl Med. 2024 Nov 4;22(1):994. doi: 10.1186/s12967-024-05736-0.
3
Polygenicity in a box: Copy number variants, neural circuit development, and neurodevelopmental disorders.

本文引用的文献

1
Proteogenomic analysis of cancer aneuploidy and normal tissues reveals divergent modes of gene regulation across cellular pathways.癌症非整倍体和正常组织的蛋白质基因组分析揭示了细胞通路中基因调控的不同模式。
Elife. 2022 Sep 21;11:e75227. doi: 10.7554/eLife.75227.
2
Extensive protein dosage compensation in aneuploid human cancers.非整倍体人类癌症中的广泛蛋白质剂量补偿。
Genome Res. 2022 Jul;32(7):1254-1270. doi: 10.1101/gr.276378.121. Epub 2022 Jun 14.
3
Regulation of protein complex partners as a compensatory mechanism in aneuploid tumors.
盒子中的多基因性:拷贝数变异、神经回路发育与神经发育障碍
Curr Opin Neurobiol. 2024 Dec;89:102917. doi: 10.1016/j.conb.2024.102917. Epub 2024 Sep 20.
4
Next generation sequencing technologies to address aberrant mRNA translation in cancer.用于解决癌症中异常mRNA翻译的下一代测序技术。
NAR Cancer. 2024 May 15;6(2):zcae024. doi: 10.1093/narcan/zcae024. eCollection 2024 Jun.
蛋白质复合物伙伴的调控作为非整倍体肿瘤的一种代偿机制。
Elife. 2022 May 16;11:e75526. doi: 10.7554/eLife.75526.
4
Hallmarks of Cancer: New Dimensions.癌症的特征:新视角。
Cancer Discov. 2022 Jan;12(1):31-46. doi: 10.1158/2159-8290.CD-21-1059.
5
dosage compensation is mediated by miRNA-transcription factor interactions in aneuploid cancer.剂量补偿由非整倍体癌症中的miRNA-转录因子相互作用介导。
iScience. 2021 Nov 8;24(12):103407. doi: 10.1016/j.isci.2021.103407. eCollection 2021 Dec 17.
6
Systems approaches identify the consequences of monosomy in somatic human cells.系统方法确定了单体性在人体体细胞中的后果。
Nat Commun. 2021 Sep 22;12(1):5576. doi: 10.1038/s41467-021-25288-x.
7
Uncoupling of gene expression from copy number presents therapeutic opportunities in aneuploid cancers.基因表达与拷贝数的解偶联为非整倍体癌症提供了治疗机会。
Cell Rep Med. 2021 Jul 21;2(7):100349. doi: 10.1016/j.xcrm.2021.100349. eCollection 2021 Jul 20.
8
Transcriptional regulation of dosage compensation in Carica papaya.番木瓜中剂量补偿的转录调控。
Sci Rep. 2021 Mar 12;11(1):5854. doi: 10.1038/s41598-021-85480-3.
9
Primary sex determination in birds depends on DMRT1 dosage, but gonadal sex does not determine adult secondary sex characteristics.鸟类的初级性别决定取决于 DMRT1 剂量,但性腺性别并不决定成年后的第二性征。
Proc Natl Acad Sci U S A. 2021 Mar 9;118(10). doi: 10.1073/pnas.2020909118.
10
Aneuploidy renders cancer cells vulnerable to mitotic checkpoint inhibition.非整倍体使癌细胞易受有丝分裂检查点抑制的影响。
Nature. 2021 Feb;590(7846):486-491. doi: 10.1038/s41586-020-03114-6. Epub 2021 Jan 27.