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一种在致病细菌中保守的蝶呤结合周质蛋白对生物膜形成的控制

Control of Biofilm Formation by an Pterin-Binding Periplasmic Protein Conserved Among Pathogenic Bacteria.

作者信息

Greenwich Jennifer L, Eagan Justin L, Feirer Nathan, Boswinkle Kaleb, Minasov George, Shuvalova Ludmilla, Inniss Nicole L, Raghavaiah Jakka, Ghosh Arun K, Satchell Karla J F, Allen Kylie D, Fuqua Clay

机构信息

Department of Biology, Indiana University, Bloomington, IN 47405 USA.

Department of Biochemistry, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061 USA.

出版信息

bioRxiv. 2023 Nov 21:2023.11.18.567607. doi: 10.1101/2023.11.18.567607.

Abstract

Biofilm formation and surface attachment in multiple Alphaproteobacteria is driven by unipolar polysaccharide (UPP) adhesins. The pathogen produces a UPP adhesin, which is regulated by the intracellular second messenger cyclic diguanylate monophosphate (cdGMP). Prior studies revealed that DcpA, a diguanylate cyclase-phosphodiesterase (DGC-PDE), is crucial in control of UPP production and surface attachment. DcpA is regulated by PruR, a protein with distant similarity to enzymatic domains known to coordinate the molybdopterin cofactor (MoCo). Pterins are bicyclic nitrogen-rich compounds, several of which are formed via a non-essential branch of the folate biosynthesis pathway, distinct from MoCo. The pterin-binding protein PruR controls DcpA activity, fostering cdGMP breakdown and dampening its synthesis. Pterins are excreted and we report here that PruR associates with these metabolites in the periplasm, promoting interaction with the DcpA periplasmic domain. The pteridine reductase PruA, which reduces specific dihydro-pterin molecules to their tetrahydro forms, imparts control over DcpA activity through PruR. Tetrahydromonapterin preferentially associates with PruR relative to other related pterins, and the PruR-DcpA interaction is decreased in a mutant. PruR and DcpA are encoded in an operon that is conserved amongst multiple Proteobacteria including mammalian pathogens. Crystal structures reveal that PruR and several orthologs adopt a conserved fold, with a pterin-specific binding cleft that coordinates the bicyclic pterin ring. These findings define a new pterin-responsive regulatory mechanism that controls biofilm formation and related cdGMP-dependent phenotypes in and is found in multiple additional bacterial pathogens.

摘要

多种α-变形菌中的生物膜形成和表面附着是由单极多糖(UPP)粘附素驱动的。该病原体产生一种UPP粘附素,它受细胞内第二信使环二鸟苷单磷酸(cdGMP)的调节。先前的研究表明,双鸟苷酸环化酶-磷酸二酯酶(DGC-PDE)DcpA在控制UPP产生和表面附着方面至关重要。DcpA受PruR调节,PruR是一种与已知能协调钼辅因子(MoCo)的酶结构域有远缘相似性的蛋白质。蝶呤是富含氮的双环化合物,其中几种是通过叶酸生物合成途径的一个非必需分支形成的,与MoCo不同。蝶呤结合蛋白PruR控制DcpA的活性,促进cdGMP的分解并抑制其合成。蝶呤会被分泌出来,我们在此报告PruR在周质中与这些代谢物结合,促进与DcpA周质结构域的相互作用。蝶啶还原酶PruA将特定的二氢蝶呤分子还原为其四氢形式,通过PruR对DcpA的活性进行调控。相对于其他相关蝶呤,四氢单蝶呤优先与PruR结合,并且在一个突变体中PruR-DcpA的相互作用减弱。PruR和DcpA编码在一个操纵子中,该操纵子在包括哺乳动物病原体在内的多种变形菌中是保守的。晶体结构表明,PruR和几个直系同源物具有保守的折叠结构,带有一个协调双环蝶呤环的蝶呤特异性结合裂隙。这些发现定义了一种新的蝶呤响应调节机制,该机制控制[具体细菌名称未给出]中的生物膜形成及相关的cdGMP依赖性表型,并且在多种其他细菌病原体中也存在。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7593/10680838/a939b25c01e4/nihpp-2023.11.18.567607v2-f0001.jpg

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