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CHO 培养物中跨克隆拉曼校准模型的可行性和性能。

Feasibility and performance of cross-clone Raman calibration models in CHO cultivation.

机构信息

Sartorius Stedim Biotech GmbH, Göttingen, Germany.

Computational Life Science Cluster (CLiC), Umeå University, Umeå, Sweden.

出版信息

Biotechnol J. 2024 Jan;19(1):e2300289. doi: 10.1002/biot.202300289. Epub 2023 Dec 7.

Abstract

Raman spectroscopy is widely used in monitoring and controlling cell cultivations for biopharmaceutical drug manufacturing. However, its implementation for culture monitoring in the cell line development stage has received little attention. Therefore, the impact of clonal differences, such as productivity and growth, on the prediction accuracy and transferability of Raman calibration models is not yet well described. Raman OPLS models were developed for predicting titer, glucose and lactate using eleven CHO clones from a single cell line. These clones exhibited diverse productivity and growth rates. The calibration models were evaluated for clone-related biases using clone-wise linear regression analysis on cross validated predictions. The results revealed that clonal differences did not affect the prediction of glucose and lactate, but titer models showed a significant clone-related bias, which remained even after applying variable selection methods. The bias was associated with clonal productivity and lead to increased prediction errors when titer models were transferred to cultivations with productivity levels outside the range of their training data. The findings demonstrate the feasibility of Raman-based monitoring of glucose and lactate in cell line development with high accuracy. However, accurate titer prediction requires careful consideration of clonal characteristics during model development.

摘要

拉曼光谱广泛应用于生物制药药物制造的细胞培养物的监测和控制。然而,它在细胞系开发阶段的培养监测中的应用还很少受到关注。因此,克隆差异(如生产力和生长)对拉曼校准模型的预测准确性和可转移性的影响尚未得到很好的描述。使用来自单个细胞系的 11 个 CHO 克隆,开发了用于预测效价、葡萄糖和乳酸的拉曼 OPLS 模型。这些克隆表现出不同的生产力和生长速率。使用交叉验证预测的克隆内线性回归分析对校准模型进行了与克隆相关的偏差评估。结果表明,克隆差异并不影响葡萄糖和乳酸的预测,但效价模型存在显著的与克隆相关的偏差,即使在应用变量选择方法后,这种偏差仍然存在。该偏差与克隆的生产力有关,当效价模型转移到其训练数据范围之外的生产力水平的培养物中时,会导致预测误差增加。研究结果表明,拉曼技术在细胞系开发中具有高精度监测葡萄糖和乳酸的可行性。然而,准确的效价预测需要在模型开发过程中仔细考虑克隆特征。

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