Guangdong Key Laboratory for New Technology Research of Vegetables, Vegetable Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, Guangdong, China.
College of Horticulture, South China Agricultural University, Guangzhou, 510642, Guangdong, China.
BMC Plant Biol. 2023 Nov 29;23(1):598. doi: 10.1186/s12870-023-04580-6.
The basic leucine zipper (bZIP) transcription factor family is one of the most abundant and evolutionarily conserved gene families in plants. It assumes crucial functions in the life cycle of plants, including pathogen defense, secondary metabolism, stress response, seed maturation, and flower development. Although the genome of wax gourd has been published, little is known about the functions, evolutionary background, and gene expression patterns of the bZIP gene family, which limits its utilization.
A total of 61 bZIP genes (BhbZIPs) were identified from wax gourd (Benincasa hispida) genome and divided into 12 subgroups. Whole-genome duplication (WGD) and dispersed duplication (DSD) were the main driving forces of bZIP gene family expansion in wax gourd, and this family may have undergone intense purifying selection pressure during the evolutionary process. We selected BhbZIP58, only one in the member of subgroup B, to study its expression patterns under different stresses, including heat, salt, drought, cold stress, and ABA treatment. Surprisingly, BhbZIP58 had a dramatic response under heat stress. BhbZIP58 showed the highest expression level in the root compared with leaves, stem, stamen, pistil, and ovary. In addition, BhbZIP58 protein was located in the nucleus and had transcriptional activation activity. Overexpression of BhbZIP58 in Arabidopsis enhanced their heat tolerance.
In this study, bZIP gene family is systematically bioinformatically in wax gourd for the first time. Particularly, BhbZIP58 may have an important role in heat stress. It will facilitate further research on the bZIP gene family regarding their evolutionary history and biological functions.
碱性亮氨酸拉链(bZIP)转录因子家族是植物中最丰富和进化上最保守的基因家族之一。它在植物的生命周期中发挥着至关重要的作用,包括病原体防御、次生代谢、应激反应、种子成熟和花发育。尽管已经发布了冬瓜基因组,但对于 bZIP 基因家族的功能、进化背景和基因表达模式知之甚少,这限制了其利用。
从冬瓜基因组中鉴定出 61 个 bZIP 基因(BhbZIPs),并分为 12 个亚组。全基因组复制(WGD)和分散复制(DSD)是冬瓜 bZIP 基因家族扩张的主要驱动力,该家族在进化过程中可能经历了强烈的纯化选择压力。我们选择了 BhbZIP58,它是亚组 B 中唯一的一个成员,来研究其在不同胁迫下的表达模式,包括热、盐、干旱、冷胁迫和 ABA 处理。令人惊讶的是,BhbZIP58 在热胁迫下有显著的反应。BhbZIP58 在根中的表达水平最高,其次是叶、茎、雄蕊、雌蕊和子房。此外,BhbZIP58 蛋白定位于细胞核,并具有转录激活活性。在拟南芥中过表达 BhbZIP58 增强了它们的耐热性。
本研究首次系统地对冬瓜 bZIP 基因家族进行了生物信息学分析。特别是,BhbZIP58 可能在热应激中具有重要作用。这将有助于进一步研究 bZIP 基因家族的进化历史和生物学功能。