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探究剑麻根系对镉胁迫的响应:生化和转录组分析的见解。

Exploring cadmium stress responses in sisal roots: Insights from biochemical and transcriptome analysis.

机构信息

National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University, Guiyang, China.

Environment and Plant Protection Institute, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou, Hainan, PR China.

出版信息

PLoS One. 2023 Nov 29;18(11):e0288476. doi: 10.1371/journal.pone.0288476. eCollection 2023.

Abstract

Sisal is a leaf fiber crop with a high integrated value and a wide range of uses in the application of soil remediation of heavy metal contamination. This study provides a preliminary understanding of how sisal responds to Cd stress and presents a theoretical basis for exploring the potential of sisal in the remediation of Cd-contaminated soils. In this work, the activities of the antioxidant enzymes (SOD, POD, and CAT) of sisal were measured by hydroponics with the addition of CdCl2·2.5H2O and different concentrations of Cd stress. Whole transcriptome sequencing (RNA-Seq) analysis was performed with lllumina sequencing technology, and qRT-PCR was conducted to verify the differential genes. The results obtained were as follows: (1) Short-term low concentration of Cd stress (20 mg/kg) had a transient promotion effect on the growth of sisal roots, but Cd showed a significant inhibitory effect on the growth of sisal roots over time. (2) Under different concentrations of Cd stress, the Cd content in sisal root was greater than that in sisal leaf, and Cd accumulated mainly in sisal roots. (3) With the increase of Cd stress concentration, the antioxidant enzyme catalase activity increased, peroxidase activity showed a decreasing trend, and superoxide dismutase showed a trend of increasing and then decreasing. (4) Transcriptome sequencing analysis detected 123 differentially expressed genes (DEGs), among which 85 genes were up-regulated and 38 genes were down-regulated. The DEGs were mainly concentrated in flavonoid biosynthesis and glutathione metabolism, and both processes had some regulatory effects on the Cd tolerance characteristics of sisal. This study elucidated the physiological, biochemical and transcriptomic responses of sisal under cadmium stress, and provided a theoretical basis for the ecological restoration function of sisal.

摘要

剑麻是一种叶纤维作物,具有很高的综合价值,在重金属污染土壤修复的应用中用途广泛。本研究初步了解了剑麻对 Cd 胁迫的响应机制,为探索剑麻在 Cd 污染土壤修复中的潜力提供了理论依据。本研究通过添加 CdCl2·2.5H2O 和不同浓度的 Cd 胁迫的水培实验,测定了剑麻抗氧化酶(SOD、POD 和 CAT)的活性,利用 Illumina 测序技术进行了全转录组测序(RNA-Seq)分析,并通过 qRT-PCR 对差异基因进行了验证。结果表明:(1)短期低浓度 Cd 胁迫(20 mg/kg)对剑麻根系生长有短暂的促进作用,但随着时间的推移,Cd 对剑麻根系生长表现出显著的抑制作用。(2)在不同浓度的 Cd 胁迫下,剑麻根系中的 Cd 含量大于叶片中的 Cd 含量,且 Cd 主要积累在剑麻根系中。(3)随着 Cd 胁迫浓度的增加,过氧化氢酶活性增加,过氧化物酶活性呈下降趋势,超氧化物歧化酶活性呈先增加后减少的趋势。(4)转录组测序分析检测到 123 个差异表达基因(DEGs),其中 85 个基因上调,38 个基因下调。DEGs 主要集中在类黄酮生物合成和谷胱甘肽代谢过程中,这两个过程对剑麻的 Cd 耐受特性都有一定的调控作用。本研究阐明了 Cd 胁迫下剑麻的生理、生化和转录组响应,为剑麻的生态修复功能提供了理论依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8cf9/10686430/4d9b948340f4/pone.0288476.g001.jpg

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