Cui Kai, Soudackov Alexander V, Hammes-Schiffer Sharon
Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States.
J Phys Chem Lett. 2023 Dec 14;14(49):10980-10987. doi: 10.1021/acs.jpclett.3c02282. Epub 2023 Dec 1.
The oxidation of tryptophan (Trp) is an important step in many biological processes and often occurs by sequential or concerted proton-coupled electron transfer (PCET). The apparent rate constants for the photochemical oxidation of two Trp derivatives in water have been shown to be pH-independent at low pH and to exhibit weak pH dependence at higher pH. Herein, these systems are investigated with a general, multi-channel model that includes sequential and concerted mechanisms as well as various proton donors and acceptors. This model can reproduce the kinetic data for both Trp derivatives with physically meaningful parameters and suggests that the weak pH dependence may arise from the competition between OH and HO as proton acceptors in concerted PCET. Deprotonation of an ammonium group for one of the systems leads to a more complex pH dependence at higher pH. This work demonstrates the importance of considering multiple competing channels for the analysis of the pH dependence of apparent PCET rate constants.
色氨酸(Trp)的氧化是许多生物过程中的重要步骤,通常通过连续或协同的质子耦合电子转移(PCET)发生。已表明,两种Trp衍生物在水中的光化学氧化表观速率常数在低pH下与pH无关,而在较高pH下表现出较弱的pH依赖性。本文使用一个通用的多通道模型对这些体系进行了研究,该模型包括连续和协同机制以及各种质子供体和受体。该模型可以用具有物理意义的参数重现两种Trp衍生物的动力学数据,并表明弱pH依赖性可能源于协同PCET中OH和HO作为质子受体之间的竞争。其中一个体系中铵基团的去质子化导致在较高pH下pH依赖性更为复杂。这项工作证明了在分析表观PCET速率常数的pH依赖性时考虑多个竞争通道的重要性。