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在巴西亚马逊东部马拉尼昂州发现的新沙蝇(双翅目,蚋科)记录和 COI DNA 条码。

New sand fly (Diptera, Psychodidae) records and COI DNA barcodes in the state of Maranhão, Eastern Amazon, Brazil.

机构信息

Programa de Pós-Graduação em Saúde Pública, Faculdade de Saúde Pública da Universidade de São Paulo (FSP/USP), Av. Dr. Arnaldo, 715 - Cerqueira César, São Paulo 01246-904, SP, Brazil,.

Programa de Pós-Graduação em Saúde Pública, Faculdade de Saúde Pública da Universidade de São Paulo (FSP/USP), Av. Dr. Arnaldo, 715 - Cerqueira César, São Paulo 01246-904, SP, Brazil.

出版信息

Acta Trop. 2024 Feb;250:107095. doi: 10.1016/j.actatropica.2023.107095. Epub 2023 Dec 12.

Abstract

The sand fly fauna and the usefulness of the DNA barcoding fragment of the cytochrome c oxidase subunit I (COI) gene were accessed in a forest fragment in the municipality of Governador Newton Bello, state of Maranhão, Brazil. We performed entomological collections in three independent campaigns in May and October 2021, and January 2023. Sand flies were morphologically-identified and then DNA barcoded. Sequences were deposited and analyzed in the BOLD System Database, and various species delimitation algorithms, to assess whether DNA sequences merge into taxonomic units in accordance with nominal species. In total, 1,524 sand flies were collected, comprising 32 nominal species. Nyssomyia antunesi was the most abundant species (31.5 %), followed by Psychodopygus davisi (27 %). We reported for the first time in the state of Maranhão, the presence of Lutzomyia evangelistai, Lutzomyia sherlocki, Pressatia equatorialis, and Psathyromyia barrettoi. We amplified and analyzed 67 COI barcodes of 23 species, which were merged with conspecific sequences extracted from GenBank. The maximum intraspecific p distances ranged from 0.0 % to 14.74 %, while the distances to the nearest neighbor varied from 1.67 % to 13.64 %. The phylogenetic gene tree and species delimitation tools clustered sequences into well-supported clades/clusters for each nominal species, except for Pressatia choti/Pr. equatorialis, which have the lowest interspecific genetic distance (1.67 %). We sequenced for the first time COI barcodes of Brumptomyia brumpti, Evandromyia monstruosa, Micropygomyia rorotaensis, Micropygomyia pilosa, Pintomyia christenseni, Pintomyia pacae, Pr. equatorialis, Pa. barrettoi, and Psathyromyia hermanlenti, which will be useful for further molecular identification and classification proposals of Neotropical species. This study updated the current list of the sand fly fauna for the state of Maranhão to 97, and demonstrated that COI barcodes are useful for specific identification.

摘要

在巴西马拉尼昂州 Governador Newton Bello 市的一个森林片段中,我们研究了沙蝇区系和细胞色素 c 氧化酶亚基 I (COI) 基因的 DNA 条形码片段的有用性。我们在 2021 年 5 月、10 月和 2023 年 1 月进行了三次独立的昆虫学采集。对沙蝇进行了形态学鉴定,然后进行了 DNA 条形码鉴定。将序列保存在 BOLD 系统数据库中,并使用各种物种界定算法进行分析,以评估 DNA 序列是否按照命名种合并到分类单元中。共采集沙蝇 1524 只,包括 32 个命名种。Nyssomyia antunesi 是最丰富的物种(31.5%),其次是 Psychodopygus davisi(27%)。我们首次在马拉尼昂州报告了 Lutzomyia evangelistai、Lutzomyia sherlocki、Pressatia equatorialis 和 Psathyromyia barrettoi 的存在。我们扩增并分析了 23 个物种的 67 个 COI 条形码,这些条形码与从 GenBank 中提取的同种序列合并。最大种内 p 距离范围为 0.0%至 14.74%,而最近邻距离范围为 1.67%至 13.64%。基因树和物种界定工具将序列聚类到每个命名种的支持良好的分支/聚类中,但 Pressatia choti/Pr. equatorialis 除外,它们的种间遗传距离最低(1.67%)。我们首次对 Brumptomyia brumpti、Evandromyia monstruosa、Micropygomyia rorotaensis、Micropygomyia pilosa、Pintomyia christenseni、Pintomyia pacae、Pr. equatorialis、Pa. barrettoi 和 Psathyromyia hermanlenti 的 COI 条形码进行了测序,这将有助于进一步对新热带物种进行分子鉴定和分类建议。本研究将马拉尼昂州的沙蝇区系的当前名录更新到 97 种,并证明 COI 条形码对特定鉴定很有用。

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