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关键性分析:受生物启发的非线性数据表示

Criticality Analysis: Bio-Inspired Nonlinear Data Representation.

作者信息

Olde Scheper Tjeerd V

机构信息

School of Engineering, Computing and Mathematics, Oxford Brookes University, Wheatley Campus, Oxford OX33 1HX, UK.

出版信息

Entropy (Basel). 2023 Dec 14;25(12):1660. doi: 10.3390/e25121660.

Abstract

The representation of arbitrary data in a biological system is one of the most elusive elements of biological information processing. The often logarithmic nature of information in amplitude and frequency presented to biosystems prevents simple encapsulation of the information contained in the input. Criticality Analysis (CA) is a bio-inspired method of information representation within a controlled Self-Organised Critical system that allows scale-free representation. This is based on the concept of a reservoir of dynamic behaviour in which self-similar data will create dynamic nonlinear representations. This unique projection of data preserves the similarity of data within a multidimensional neighbourhood. The input can be reduced dimensionally to a projection output that retains the features of the overall data, yet has a much simpler dynamic response. The method depends only on the Rate Control of Chaos applied to the underlying controlled models, which allows the encoding of arbitrary data and promises optimal encoding of data given biologically relevant networks of oscillators. The CA method allows for a biologically relevant encoding mechanism of arbitrary input to biosystems, creating a suitable model for information processing in varying complexity of organisms and scale-free data representation for machine learning.

摘要

生物系统中任意数据的表示是生物信息处理中最难以捉摸的要素之一。呈现给生物系统的信息在幅度和频率上通常具有对数性质,这使得输入中包含的信息难以简单封装。临界性分析(CA)是一种受生物启发的信息表示方法,用于在可控的自组织临界系统中实现无标度表示。这基于动态行为库的概念,其中自相似数据将创建动态非线性表示。这种独特的数据投影保留了多维邻域内数据的相似性。输入可以通过降维得到投影输出,该输出保留了整体数据的特征,但具有更简单的动态响应。该方法仅依赖于应用于基础受控模型的混沌速率控制,这允许对任意数据进行编码,并有望在给定生物学相关振荡器网络的情况下对数据进行最优编码。CA方法允许对生物系统的任意输入进行生物学相关的编码机制,为不同复杂程度的生物体中的信息处理创建合适的模型,并为机器学习提供无标度数据表示。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d68e/10742830/a145b6b1f6c4/entropy-25-01660-g001.jpg

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