Dr. Rajendra Prasad Centre for Ophthalmic Sciences, All India Institute of Medical Sciences (AIIMS), New Delhi, India.
Translational Bioinformatics Group, International Centre for Genetic Engineering and Biotechnology (ICGEB), Jawaharlal Nehru University, New Delhi, India.
Indian J Ophthalmol. 2024 Mar 1;72(3):339-346. doi: 10.4103/IJO.IJO_1456_23. Epub 2023 Dec 26.
To predict the presence of angle dysgenesis on anterior-segment optical coherence tomography (ADoA) by using deep learning (DL) and to correlate ADoA with mutations in known glaucoma genes.
In total, 800 high-definition anterior-segment optical coherence tomography (AS-OCT) images were included, of which 340 images were used to build the machine learning (ML) model. Images used to build the ML model included 170 scans of primary congenital glaucoma (16 patients), juvenile-onset open-angle glaucoma (62 patients), and adult-onset primary open-angle glaucoma eyes (37 patients); the rest were controls (n = 85). The genetic validation dataset consisted of another 393 images of patients with known mutations that were compared with 320 images of healthy controls.
ADoA was defined as the absence of Schlemm's canal, the presence of hyperreflectivity over the region of the trabecular meshwork, or a hyperreflective membrane. DL was used to classify a given AS-OCT image as either having angle dysgenesis or not. ADoA was then specifically looked for on AS-OCT images of patients with mutations in the known genes for glaucoma.
The final prediction, which was a consensus-based outcome from the three optimized DL models, had an accuracy of >95%, a specificity of >97%, and a sensitivity of >96% in detecting ADoA in the internal test dataset. Among the patients with known gene mutations, ( MYOC, CYP1B1, FOXC1, and LTBP2 ) ADoA was observed among all the patients in the majority of the images, compared to only 5% of the healthy controls.
ADoA can be objectively identified using models built with DL.
利用深度学习(DL)预测前节光学相干断层扫描(AS-OCT)中的房角发育不良(ADoA),并将 ADoA 与已知青光眼基因的突变相关联。
共纳入 800 例高清前节光学相干断层扫描(AS-OCT)图像,其中 340 例用于构建机器学习(ML)模型。用于构建 ML 模型的图像包括 16 例原发性先天性青光眼(PCG)患者的 170 个扫描、62 例青少年开角型青光眼(JOAG)患者和 37 例成人开角型原发性青光眼(POAG)患者的扫描;其余为对照组(n=85)。基因验证数据集由另外 393 例已知突变患者的图像组成,并与 320 例健康对照组的图像进行比较。
将 ADoA 定义为缺乏 Schlemm 管、小梁网区域存在高反射性或高反射性膜。DL 用于将给定的 AS-OCT 图像分类为存在或不存在房角发育不良。然后在已知青光眼基因发生突变的患者的 AS-OCT 图像上专门寻找 ADoA。
最终的预测结果是三个优化的 DL 模型得出的共识结果,在内部测试数据集中,其检测 ADoA 的准确率>95%,特异性>97%,敏感性>96%。在已知基因突变的患者中(MYOC、CYP1B1、FOXC1 和 LTBP2),与仅 5%的健康对照组相比,在大多数图像中,所有患者均观察到 ADoA。
可使用基于 DL 构建的模型客观地识别 ADoA。