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贝叶斯序贯设计在具有多层次数据研究中的应用。

Bayesian sequential designs in studies with multilevel data.

机构信息

Department of Methodology and Statistics, Utrecht University, PO Box 80140, 3508 TC, Utrecht, The Netherlands.

出版信息

Behav Res Methods. 2024 Sep;56(6):5849-5861. doi: 10.3758/s13428-023-02320-0. Epub 2023 Dec 29.

DOI:10.3758/s13428-023-02320-0
PMID:38158552
Abstract

In many studies in the social and behavioral sciences, the data have a multilevel structure, with subjects nested within clusters. In the design phase of such a study, the number of clusters to achieve a desired power level has to be calculated. This requires a priori estimates of the effect size and intraclass correlation coefficient. If these estimates are incorrect, the study may be under- or overpowered. This may be overcome by using a group-sequential design, where interim tests are done at various points in time of the study. Based on interim test results, a decision is made to either include additional clusters or to reject the null hypothesis and conclude the study. This contribution introduces Bayesian sequential designs as an alternative to group-sequential designs. This approach compares various hypotheses based on the support in the data for each of them. If neither hypothesis receives a sufficient degree of support, additional clusters are included in the study and the Bayes factor is recalculated. This procedure continues until one of the hypotheses receives sufficient support. This paper explains how the Bayes factor is used as a measure of support for a hypothesis and how a Bayesian sequential design is conducted. A simulation study in the setting of a two-group comparison was conducted to study the effects of the minimum and maximum number of clusters per group and the desired degree of support. It is concluded that Bayesian sequential designs are a flexible alternative to the group sequential design.

摘要

在社会科学和行为科学的许多研究中,数据具有多层次结构,其中主体嵌套在聚类中。在这种研究的设计阶段,必须计算达到所需功率水平所需的聚类数量。这需要对效应大小和组内相关系数进行先验估计。如果这些估计不正确,研究可能会功率不足或过度。这可以通过使用群组序贯设计来克服,其中在研究的不同时间点进行中间测试。根据中间测试结果,决定是增加额外的聚类,还是拒绝零假设并结束研究。本贡献介绍了贝叶斯序贯设计作为群组序贯设计的替代方案。这种方法基于每个假设在数据中的支持程度来比较各种假设。如果没有一个假设得到足够的支持,则在研究中增加更多的聚类,并重新计算贝叶斯因子。此过程将一直持续到其中一个假设得到足够的支持。本文解释了如何将贝叶斯因子用作假设支持的度量标准,以及如何进行贝叶斯序贯设计。在两组比较的设置中进行了模拟研究,以研究每组的最小和最大聚类数量以及所需的支持程度的影响。结论是,贝叶斯序贯设计是群组序贯设计的灵活替代方案。

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Bayesian sequential designs in studies with multilevel data.贝叶斯序贯设计在具有多层次数据研究中的应用。
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Bayesian sample size determination for longitudinal intervention studies with linear and log-linear growth.用于具有线性和对数线性增长的纵向干预研究的贝叶斯样本量确定
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本文引用的文献

1
Sample size determination for Bayesian ANOVAs with informative hypotheses.具有信息性假设的贝叶斯方差分析的样本量确定
Front Psychol. 2022 Nov 22;13:947768. doi: 10.3389/fpsyg.2022.947768. eCollection 2022.
2
CRTpowerdist: An R package to calculate attained power and construct the power distribution for cross-sectional stepped-wedge and parallel cluster randomized trials.CRTpowerdist:一个用于计算获得的功效并为横截面阶乘楔形和平行群组随机试验构建功效分布的 R 包。
Comput Methods Programs Biomed. 2021 Sep;208:106255. doi: 10.1016/j.cmpb.2021.106255. Epub 2021 Jun 25.
3
Bayesian updating: increasing sample size during the course of a study.
贝叶斯更新:在研究过程中增加样本量。
BMC Med Res Methodol. 2021 Jul 5;21(1):137. doi: 10.1186/s12874-021-01334-6.
4
Sample-size determination for the Bayesian t test and Welch's test using the approximate adjusted fractional Bayes factor.使用近似调整的分数 Bayes 因子进行贝叶斯 t 检验和 Welch 检验的样本量确定。
Behav Res Methods. 2021 Feb;53(1):139-152. doi: 10.3758/s13428-020-01408-1.
5
Bayesian alternatives to null hypothesis significance testing in biomedical research: a non-technical introduction to Bayesian inference with JASP.贝叶斯替代零假设检验在生物医学研究中的应用:使用 JASP 进行贝叶斯推理的非技术性介绍
BMC Med Res Methodol. 2020 Jun 5;20(1):142. doi: 10.1186/s12874-020-00980-6.
6
A tutorial on sample size calculation for multiple-period cluster randomized parallel, cross-over and stepped-wedge trials using the Shiny CRT Calculator.使用 Shiny CRT Calculator 进行多周期群组随机平行、交叉和阶跃楔形试验的样本量计算教程。
Int J Epidemiol. 2020 Jun 1;49(3):979-995. doi: 10.1093/ije/dyz237.
7
A tutorial on testing hypotheses using the Bayes factor.贝叶斯因子假设检验教程。
Psychol Methods. 2019 Oct;24(5):539-556. doi: 10.1037/met0000201. Epub 2019 Feb 11.
8
Bayesian evaluation of informative hypotheses for multiple populations.多群体信息假设的贝叶斯评估。
Br J Math Stat Psychol. 2019 May;72(2):219-243. doi: 10.1111/bmsp.12145. Epub 2018 Oct 21.
9
Approximated adjusted fractional Bayes factors: A general method for testing informative hypotheses.近似调整分数贝叶斯因子:一种检验信息性假设的通用方法。
Br J Math Stat Psychol. 2018 May;71(2):229-261. doi: 10.1111/bmsp.12110. Epub 2017 Aug 31.
10
Sequential hypothesis testing with Bayes factors: Efficiently testing mean differences.贝叶斯因子的序贯假设检验:高效检验均值差异。
Psychol Methods. 2017 Jun;22(2):322-339. doi: 10.1037/met0000061. Epub 2015 Dec 14.