焦亡介导的生物标志物模式:帕金森病的一种新兴诊断方法。

The pyroptosis mediated biomarker pattern: an emerging diagnostic approach for Parkinson's disease.

机构信息

Beijing Key Laboratory for Separation and Analysis in Biomedicine and Pharmaceuticals, School of Medical Technology, Beijing Institute of Technology, Zhongguancun South Street, Haidian District, Beijing, 100081, People's Republic of China.

Department of Neurology, Aerospace Center Hospital, Beijing, 100049, People's Republic of China.

出版信息

Cell Mol Biol Lett. 2024 Jan 3;29(1):7. doi: 10.1186/s11658-023-00516-y.

Abstract

BACKGROUND

Parkinson's disease (PD) affects 1% of people over 60, and long-term levodopa treatment can cause side effects. Early diagnosis is of great significance in slowing down the pathological process of PD. Multiple pieces of evidence showed that non-coding RNAs (ncRNAs) could participate in the progression of PD pathology. Pyroptosis is known to be regulated by ncRNAs as a key pathological feature of PD. Therefore, evaluating ncRNAs and pyroptosis-related proteins in serum could be worthy biomarkers for early diagnosis of PD.

METHODS

NcRNAs and pyroptosis/inflammation mRNA levels were measured with reverse transcriptase quantitative polymerase chain reaction (RT-qPCR). Luciferase assays were performed to confirm GSDME as a target of miR-675-5p and HMGB1 as a target of miR-1247-5p. In the serum of healthy controls (n = 106) and PD patients (n = 104), RT-qPCR was utilized to assess miR-675-5p, miR-1247-5p, and two related ncRNAs (circSLC8A1and lncH19) levels. The enzyme-linked immunosorbent assay measured serum levels of pyroptosis-related proteins in controls (n = 54) and PD patients (n = 70).

RESULTS

Our data demonstrated that miR-675-5p and miR-1247-5p significantly changed in PD neuron and animal models. Overexpressed miR-675-5p or downregulated miR-1247-5p could regulate pyroptosis and inflammation in PD neuron models. Using the random forest algorithm, we constructed a classifier based on PD neuron-pyroptosis pathology (four ncRNAs and six proteins) having better predictive power than single biomarkers (AUC = 92%). Additionally, we verified the performance of the classifier in early-stage PD patients (AUC ≥ 88%).

CONCLUSION

Serum pyroptosis-related ncRNAs and proteins could serve as reliable, inexpensive, and non-invasive diagnostic biomarkers for PD.

LIMITATIONS

All participants were from the same region. Additionally, longitudinal studies in the aged population are required to explore the practical application value of the classifier.

摘要

背景

帕金森病(PD)影响 60 岁以上人群的 1%,长期左旋多巴治疗会引起副作用。早期诊断对减缓 PD 病理进程具有重要意义。多项证据表明,非编码 RNA(ncRNA)可能参与 PD 病理进程。细胞焦亡被认为是由 ncRNA 调节的 PD 的一个关键病理特征。因此,评估血清中的 ncRNA 和细胞焦亡相关蛋白可能是 PD 早期诊断的有价值生物标志物。

方法

采用逆转录定量聚合酶链反应(RT-qPCR)检测 ncRNA 和细胞焦亡/炎症 mRNA 水平。通过荧光素酶测定法证实 GSDME 是 miR-675-5p 的靶基因,HMGB1 是 miR-1247-5p 的靶基因。在健康对照组(n=106)和 PD 患者组(n=104)的血清中,采用 RT-qPCR 评估 miR-675-5p、miR-1247-5p 以及两种相关 ncRNA(circSLC8A1 和 lncH19)的水平。酶联免疫吸附测定法测量对照组(n=54)和 PD 患者组(n=70)的血清细胞焦亡相关蛋白水平。

结果

我们的数据表明,miR-675-5p 和 miR-1247-5p 在 PD 神经元和动物模型中显著改变。过表达 miR-675-5p 或下调 miR-1247-5p 可调节 PD 神经元模型中的细胞焦亡和炎症。我们使用随机森林算法,基于 PD 神经元-细胞焦亡病理(四种 ncRNA 和六种蛋白)构建了一个分类器,其预测能力优于单个生物标志物(AUC=92%)。此外,我们在早期 PD 患者中验证了分类器的性能(AUC≥88%)。

结论

血清细胞焦亡相关 ncRNA 和蛋白可作为 PD 可靠、廉价和非侵入性的诊断生物标志物。

局限性

所有参与者均来自同一地区。此外,需要在老年人群中进行纵向研究,以探索分类器的实际应用价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3055/10765853/4711c0d6cc8f/11658_2023_516_Fig1_HTML.jpg

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