Aquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, Louisiana, USA.
J Exp Zool B Mol Dev Evol. 2024 May;342(3):278-290. doi: 10.1002/jez.b.23234. Epub 2024 Jan 7.
Development of reliable germplasm repositories is critical for preservation of genetic resources of aquatic species, which are widely utilized to support biomedical innovation by providing a foundational source for naturally occurring variation and development of new variants through genetic manipulations. A significant barrier in repository development is the lack of cryopreservation capability and reproducibility across the research community, posing great risks of losing advances developed from billions of dollars of research investment. The emergence of open scientific hardware has fueled a new movement across biomedical research communities. With the increasing accessibility of consumer-level fabrication technologies, such as three-dimensional printers, open hardware devices can be custom designed, and design files distributed to community members for enhancing rigor, reproducibility, and standardization. The overall goal of this review is to explore pathways to create open-hardware ecosystems among the communities using aquatic model resources for biomedical research. To gain feedback and insights from community members, an interactive workshop focusing on open-hardware applications in germplasm repository development was held at the 2022 Aquatic Models for Human Disease Conference, Woods Hole, Massachusetts. This work integrates conceptual strategies with practical insights derived from workshop interactions using examples of germplasm repository development. These insights can be generalized for establishment of open-hardware ecosystems for a broad biomedical research community. The specific objectives were to: (1) introduce an open-hardware ecosystem concept to support biomedical research; (2) explore pathways toward open-hardware ecosystems through four major areas, and (3) identify opportunities and future directions.
发展可靠的种质资源库对于保存水生物种的遗传资源至关重要,水生物种被广泛用于通过为自然发生的变异提供基础来源,并通过遗传操作开发新变体,从而支持生物医学创新。种质资源库发展的一个重大障碍是缺乏跨研究界的冷冻保存能力和可重复性,这给从数十亿美元的研究投资中开发的进展带来了巨大的丢失风险。开放科学硬件的出现推动了生物医学研究界的新运动。随着消费级制造技术(如三维打印机)的日益普及,开放硬件设备可以进行定制设计,并将设计文件分发给社区成员,以提高严谨性、可重复性和标准化。本综述的总体目标是探索在使用水生模型资源进行生物医学研究的社区中创建开放硬件生态系统的途径。为了从社区成员那里获得反馈和见解,在马萨诸塞州伍兹霍尔举行的 2022 年水生人类疾病模型会议上举办了一个专注于种质资源库开发中开放硬件应用的互动研讨会。这项工作整合了概念策略和从研讨会互动中得出的实践见解,使用种质资源库开发的例子。这些见解可以推广到更广泛的生物医学研究社区的开放硬件生态系统的建立。具体目标是:(1)向支持生物医学研究的开放硬件生态系统概念介绍;(2)通过四个主要领域探索开放硬件生态系统的途径;(3)确定机会和未来方向。