You Zhiyuan, He Jiqing, Gao Zhongming
School of Clinical Medicine, Hangzhou Normal University, Hangzhou, 310005, China.
Department of Obstetrics, The Affiliated Hospital of Hangzhou Normal University, Hangzhou, 310005, China.
Heliyon. 2023 Dec 14;10(1):e23661. doi: 10.1016/j.heliyon.2023.e23661. eCollection 2024 Jan 15.
Cuproptosis is a recently discovered form of nonapoptotic programmed cell death. However, no research on cuproptosis in the context of adrenocortical carcinoma has been conducted, and the prognostic value of assessing cuproptosis remains unclear.
In this study, we established comprehensive models to assess gene expression changes, mutation status, and prognosis prediction and developed a prognostic nomogram for cuproptosis-related genes. Using data from The Cancer Genome Atlas (TCGA), Gene Expression Omnibus (GEO), and Genotype-Tissue Expression (GTEx) databases, an analysis of 11 cuproptosis-related genes was performed. Additionally, a risk scoring method and nomogram were used to assess the relationships among cuproptosis-associated genes, transcript expression, clinical characteristics, and prognosis. The connections among tumors, immune checkpoints, and immune infiltration were also analyzed.
The patterns observed in patients with adrenocortical carcinoma who were assessed using cuproptosis-associated risk scores provide useful information for understanding gene mutations, clinical outcomes, immune cell infiltration, and immune checkpoint analysis results. , , , , , , and were differentially expressed in patients with adrenocortical carcinoma and normal controls. In addition, higher risk scores were significantly associated with poor overall survival and progression-free interval. The nomogram model subsequently developed to facilitate the clinical application of the analysis showed good predictive and calibration capabilities. GSE10927 and GSE33371 were used for independent cohort validation. Moreover, , , and other cuproptosis-related genes were significantly associated with immune infiltration and checkpoints.
We confirmed that our model had excellent predictive ability in patients with adrenocortical carcinoma. Therefore, an in-depth evaluation of patients using cuproptosis-related risk scores is clinically essential and can assist in therapy in the future.
铜死亡是最近发现的一种非凋亡程序性细胞死亡形式。然而,尚未有关于肾上腺皮质癌中铜死亡的研究,评估铜死亡的预后价值仍不明确。
在本研究中,我们建立了综合模型来评估基因表达变化、突变状态和预后预测,并开发了一种铜死亡相关基因的预后列线图。利用来自癌症基因组图谱(TCGA)、基因表达综合数据库(GEO)和基因型-组织表达(GTEx)数据库的数据,对11个铜死亡相关基因进行了分析。此外,使用风险评分方法和列线图来评估铜死亡相关基因、转录本表达、临床特征和预后之间的关系。还分析了肿瘤、免疫检查点和免疫浸润之间的联系。
使用与铜死亡相关的风险评分评估肾上腺皮质癌患者所观察到的模式,为理解基因突变、临床结果、免疫细胞浸润和免疫检查点分析结果提供了有用信息。 、 、 、 、 、 和 在肾上腺皮质癌患者和正常对照中差异表达。此外,较高的风险评分与较差的总生存期和无进展生存期显著相关。随后开发的便于临床应用分析的列线图模型显示出良好的预测和校准能力。使用GSE10927和GSE33371进行独立队列验证。此外, 、 及其他铜死亡相关基因与免疫浸润和检查点显著相关。
我们证实我们的模型在肾上腺皮质癌患者中具有出色的预测能力。因此,使用与铜死亡相关的风险评分对患者进行深入评估在临床上至关重要,并且在未来可协助治疗。