Department of Clinical Research Center, Dazhou Central Hospital, Dazhou, Sichuan 635000, China.
Department of Ultrasound, Zhongnan Hospital of Wuhan University, Wuhan, Hubei 430071, China.
Carcinogenesis. 2024 Mar 11;45(3):170-180. doi: 10.1093/carcin/bgad098.
Approximately 50% of colorectal cancer (CRC) patients would develop metastasis with poor prognosis, therefore, it is necessary to effectively predict metastasis in clinical treatment. In this study, we aimed to establish a machine-learning model for predicting metastasis in CRC patients by considering radiomics and transcriptomics simultaneously. Here, 1023 patients with CRC from three centers were collected and divided into five queues (Dazhou Central Hospital n = 517, Nanchong Central Hospital n = 120 and the Cancer Genome Atlas (TCGA) n = 386). A total of 854 radiomics features were extracted from tumor lesions on CT images, and 217 differentially expressed genes were obtained from non-metastasis and metastasis tumor tissues using RNA sequencing. Based on radiotranscriptomic (RT) analysis, a novel RT model was developed and verified through genetic algorithms (GA). Interleukin (IL)-26, a biomarker in RT model, was verified for its biological function in CRC metastasis. Furthermore, 15 radiomics variables were screened through stepwise regression, which was highly correlated with the IL26 expression level. Finally, a radiomics model (RA) was established by combining GA and stepwise regression analysis with radiomics features. The RA model exhibited favorable discriminatory ability and accuracy for metastasis prediction in two independent verification cohorts. We designed multicenter, multi-scale cohorts to construct and verify novel combined radiomics and genomics models for predicting metastasis in CRC. Overall, RT model and RA model might help clinicians in directing personalized diagnosis and therapeutic regimen selection for patients with CRC.
大约 50%的结直肠癌(CRC)患者会发生预后不良的转移,因此,在临床治疗中有效地预测转移是必要的。在这项研究中,我们旨在通过同时考虑放射组学和转录组学,建立一个用于预测 CRC 患者转移的机器学习模型。在这里,从三个中心收集了 1023 名 CRC 患者,并将其分为五个队列(达州中心医院 n=517,南充中心医院 n=120 和癌症基因组图谱(TCGA)n=386)。从 CT 图像上的肿瘤病变中提取了 854 个放射组学特征,并使用 RNA 测序从无转移和转移肿瘤组织中获得了 217 个差异表达基因。基于放射转录组学(RT)分析,通过遗传算法(GA)开发并验证了一种新的 RT 模型。在 RT 模型中,白细胞介素(IL)-26 作为一种生物标志物,其在 CRC 转移中的生物学功能得到了验证。此外,通过逐步回归筛选了 15 个与 IL26 表达水平高度相关的放射组学变量。最后,通过结合 GA 和逐步回归分析以及放射组学特征,建立了一个放射组学模型(RA)。RA 模型在两个独立的验证队列中对转移预测均表现出良好的判别能力和准确性。我们设计了多中心、多尺度队列,构建并验证了用于预测 CRC 转移的新型联合放射组学和基因组学模型。总的来说,RT 模型和 RA 模型可能有助于临床医生为 CRC 患者指导个性化诊断和治疗方案选择。