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新种及新种,从盐渍土壤和内陆太阳能盐场分离出的嗜盐古菌。

sp. nov. and sp. nov., halophilic archaea isolated from saline soil and an inland solar saltern.

作者信息

Hu Yao, Ma Xue, Li Xin-Xin, Tan Shun, Cheng Mu, Hou Jing, Cui Heng-Lin

机构信息

School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, PR China.

出版信息

Int J Syst Evol Microbiol. 2024 Jan;74(1). doi: 10.1099/ijsem.0.006231.

Abstract

Two extremely halophilic archaeal strains, GSLN9 and XZYJT29, were isolated from the saline soil in different regions of western China. Both strains GSLN9 and XZYJT29 have two 16S rRNA genes with similarities of 95.1 and 94.8 %, respectively. Strain GSLN9 was mostly related to the genus based on 16S rRNA (showing 91.0-96.0 % identities) and genes (showing 92.0 % identity). Strain XZYJT29 showed 92.1-97.6 % (16S rRNA gene) and 91.4-93.1 % ( gene) sequence similarities to its relatives in the genus , respectively. The polar lipid profile of strain GSLN9 included phosphatidic acid (PA), phosphatidylglycerol (PG), phosphatidylglycerol phosphate methyl ester (PGP-Me), phosphatidylglycerol sulphate (PGS), sulphated mannosyl glucosyl diether (S-DGD-1) and sulphated galactosyl mannosyl glucosyl diether (S-TGD-1), mostly similar to that of H22. PA, PG, PGP-Me, S-DGD-1 (S-DGD-PA), S-DGD, S-TGD-1 and an unidentified glycolipid were detected in strain XZYJT29; this polar lipid composition is similar to those of members of the genus . The average nucleotide identity, digital DNA-DNA hybridization and average amino acid identity values between these two strains and their relatives of the genera and were no more than 82, 27 and 80 %, respectively, much lower than the thresholds for species demarcation. Other phenotypic characterization results indicated that strains GSLN9 and XZYJT29 can be differentiated from the current species of the genera and , respectively. These results revealed that strains GSLN9 (=CGMCC 1.15215=JCM 30842) and XZYJT29 (=CGMCC 1.15828=JCM 31853) represent novel species of and , for which the names sp. nov. and sp. nov. are proposed.

摘要

从中国西部不同地区的盐渍土中分离出两株极端嗜盐古菌菌株,GSLN9和XZYJT29。菌株GSLN9和XZYJT29均有两个16S rRNA基因,相似度分别为95.1%和94.8%。基于16S rRNA(同一性为91.0 - 96.0%)和[具体基因名称未给出]基因(同一性为92.0%),菌株GSLN9与[具体属名未给出]属的关系最为密切。菌株XZYJT29与其在[具体属名未给出]属中的亲缘关系在16S rRNA基因方面显示出92.1 - 97.6%的序列相似度,在[具体基因名称未给出]基因方面显示出91.4 - 93.1%的序列相似度。菌株GSLN9的极性脂谱包括磷脂酸(PA)、磷脂酰甘油(PG)、磷脂酰甘油磷酸甲酯(PGP - Me)、磷脂酰甘油硫酸盐(PGS)、硫酸化甘露糖基葡糖基二醚(S - DGD - 1)和硫酸化半乳糖基甘露糖基葡糖基二醚(S - TGD - 1),大多与H22的相似。在菌株XZYJT29中检测到PA、PG、PGP - Me、S - DGD - 1(S - DGD - PA)、S - DGD(此处原文可能有误,推测应为S - DGD - 1之类)、S - TGD - 1和一种未鉴定的糖脂;这种极性脂组成与[具体属名未给出]属成员的相似。这两株菌株与其在[具体属名未给出]属和[具体属名未给出]属中的亲缘关系之间的平均核苷酸同一性、数字DNA - DNA杂交和平均氨基酸同一性值分别不超过82%、27%和80%,远低于物种划分的阈值。其他表型特征结果表明,菌株GSLN9和XZYJT29可分别与[具体属名未给出]属和[具体属名未给出]属的现有物种区分开来。这些结果表明,菌株GSLN9(= CGMCC 1.15215 = JCM 30842)和XZYJT29(= CGMCC 1.15828 = JCM 31853)分别代表[具体属名未给出]属和[具体属名未给出]属的新物种,为此提出[具体属名未给出] sp. nov.和[具体属名未给出] sp. nov.的名称。

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