U.S. Department of Agriculture, Agricultural Research Service, New Orleans, LA 70124, USA.
J Ind Microbiol Biotechnol. 2024 Jan 9;51. doi: 10.1093/jimb/kuae001.
Out of the 166 articles published in Journal of Industrial Microbiology and Biotechnology (JIMB) in 2019-2020 (not including special issues or review articles), 51 of them used a statistical test to compare two or more means. The most popular test was the (Standard) t-test, which often was used to compare several pairs of means. Other statistical procedures used included Fisher's least significant difference (LSD), Tukey's honest significant difference (HSD), and Welch's t-test; and to a lesser extent Bonferroni, Duncan's Multiple Range, Student-Newman-Keuls, and Kruskal-Wallis tests. This manuscript examines the performance of some of these tests with simulated experimental data, typical of those reported by JIMB authors. The results show that many of the most common procedures used by JIMB authors result in statistical conclusions that are prone to have large false positive (Type I) errors. These error-prone procedures included the multiple t-test, multiple Welch's t-test, and Fisher's LSD. These multiple comparisons procedures were compared with alternatives (Fisher-Hayter, Tukey's HSD, Bonferroni, and Dunnett's t-test) that were able to better control Type I errors.
NON-TECHNICAL SUMMARY: The aim of this work was to review and recommend statistical procedures for Journal of Industrial Microbiology and Biotechnology authors who often compare the effect of several treatments on microorganisms and their functions.
2019-2020 年在《工业微生物学与生物技术杂志》(JIMB)上发表的 166 篇文章(不包括特刊或综述文章)中,有 51 篇使用了统计检验来比较两个或更多的平均值。最受欢迎的检验是(标准)t 检验,它常用于比较几个平均值。其他使用的统计程序包括 Fisher 的最小显著差异(LSD)、Tukey 的诚实显著差异(HSD)和 Welch 的 t 检验;以及在较小程度上的 Bonferroni、Duncan 的多重范围、Student-Newman-Keuls 和 Kruskal-Wallis 检验。本文用模拟实验数据检验了其中一些检验的性能,这些数据与 JIMB 作者报告的数据典型相似。结果表明,JIMB 作者常用的许多最常见的程序导致易于产生大量假阳性(I 类)错误的统计结论。这些容易出错的程序包括多重 t 检验、多重 Welch t 检验和 Fisher LSD。这些多重比较程序与能更好地控制 I 类错误的替代程序(Fisher-Hayter、Tukey 的 HSD、Bonferroni 和 Dunnett 的 t 检验)进行了比较。
本工作的目的是为《工业微生物学与生物技术杂志》的作者回顾和推荐统计程序,这些作者经常比较几种处理方法对微生物及其功能的影响。