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使用下一代基因编辑工具进行联合筛选。

Pooled screening with next-generation gene editing tools.

作者信息

Zhou Liqun, Yang Luojia, Feng Yanzhi, Chen Sidi

机构信息

Department of Genetics, Yale University School of Medicine, New Haven, CT, USA.

System Biology Institute, Yale University, West Haven, CT, USA.

出版信息

Curr Opin Biomed Eng. 2023 Dec;28. doi: 10.1016/j.cobme.2023.100479. Epub 2023 Jun 21.

Abstract

Pooled screening creates a pool of cells with genetic variants, allowing for the simultaneous examination for changes in behavior or function. By selectively inducing mutations or perturbing expression, it enables scientists to systematically investigate the function of genes or genetic elements. Emerging gene editing tools, such as CRISPR, coupled with advances in sequencing and computational capabilities, provide growing opportunities to understand biological processes in humans, animals, and plants as well as to identify potential targets for therapeutic interventions and agricultural research. In this review, we highlight the recent advances of pooled screens using next-generation gene editing tools along with relevant challenges and describe potential future directions of this technology.

摘要

汇集筛选可创建一个具有遗传变异的细胞库,从而能够同时检测行为或功能的变化。通过选择性地诱导突变或干扰基因表达,它使科学家能够系统地研究基因或遗传元件的功能。诸如CRISPR等新兴的基因编辑工具,再加上测序和计算能力的进步,为理解人类、动物和植物中的生物过程以及识别治疗干预和农业研究的潜在靶点提供了越来越多的机会。在本综述中,我们重点介绍了使用下一代基因编辑工具进行汇集筛选的最新进展以及相关挑战,并描述了该技术未来可能的发展方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/023c/10786633/52bced21b7f5/nihms-1911880-f0001.jpg

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本文引用的文献

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Massively parallel knock-in engineering of human T cells.大规模平行基因敲入人 T 细胞工程。
Nat Biotechnol. 2023 Sep;41(9):1239-1255. doi: 10.1038/s41587-022-01639-x. Epub 2023 Jan 26.
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Genome-scale CRISPR screening in a single mouse liver.在单个小鼠肝脏中进行全基因组规模的CRISPR筛选。
Cell Genom. 2022 Dec 14;2(12). doi: 10.1016/j.xgen.2022.100217. Epub 2022 Nov 15.
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Targeting TBK1 to overcome resistance to cancer immunotherapy.针对 TBK1 以克服癌症免疫疗法耐药性。
Nature. 2023 Mar;615(7950):158-167. doi: 10.1038/s41586-023-05704-6. Epub 2023 Jan 12.
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CRISPR screens for functional interrogation of immunity.CRISPR 筛选用于免疫功能的研究。
Nat Rev Immunol. 2023 Jun;23(6):363-380. doi: 10.1038/s41577-022-00802-4. Epub 2022 Dec 8.

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