Zhang Yanpeng, Sun Jingyang, Li Meng, Hou Liren, Wang Zhiyu, Dong Huanhuan, Xu Wenjun, Jiang Rongxuan, Geng Yuhan, Guan Chungen, Zhu Zijiang, Wang Hongyi, Gong Qiuyu, Zhang Guangjian
Department of Thoracic Surgery, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
The First Clinical Medical College of Gansu University of Chinese Medicine (Gansu Provincial Hospital), Lanzhou, China.
Heliyon. 2023 Dec 19;10(1):e23502. doi: 10.1016/j.heliyon.2023.e23502. eCollection 2024 Jan 15.
Disulfidptosis, a newly revealed form of cell death, regulated by numerous genes that has been recently identified. The exact role of disulfidptosis in lung adenocarcinoma (LUAD) still uncertain. Objective of this study was to explore potential prognostic markers among disulfidptosis genes in LUAD. By combining transcriptomic information from Gene Expression Omnibus databases and The Cancer Genome Atlas, we identified differentially expressed and prognostic disulfidptosis genes. By conducting least absolute shrinkage and selection operator with multivariate Cox regression, four disulfidptosis genes were selected to create the prognostic signature. The implementation of the signature separated the training and validation cohorts into groups with high- and low-risk. Subsequently, the model was verified by conducting an independent analysis of receiver operating characteristic (ROC) curves. Further comparisons were made between the two risk-divided groups with regards the tumor microenvironment, immune cell infiltration, immunotherapy response, and drug sensitivity. The signature was constructed using four disulfidptosis-related genes: SLC7A11, SLC3A2, NCKAP1, and GYS1. According to ROC curves, the signature was effective for predicting LUAD prognosis. In addition, the prognostic signature correlated with sensitivity to chemotherapeutic agents and the efficacy of immunotherapy in LUAD. Finally, through external validation, we showed that NCKAP1 are correlated with tumor migration, proliferation, and invasion of LUAD cells. GYS1 affects immune cell, especially M2 macrophage infiltration in the tumor microenvironment. The disulfidptosis four-gene model can reliably predict the prognosis of patients diagnosed with LUAD, thereby providing valuable information for clinical applications and immunotherapy.
双硫死亡是一种新发现的细胞死亡形式,受众多最近已鉴定出的基因调控。双硫死亡在肺腺癌(LUAD)中的确切作用仍不确定。本研究的目的是探索LUAD中双硫死亡基因中的潜在预后标志物。通过整合来自基因表达综合数据库和癌症基因组图谱的转录组信息,我们鉴定出差异表达和具有预后意义的双硫死亡基因。通过进行最小绝对收缩和选择算子结合多变量Cox回归,选择了四个双硫死亡基因来创建预后特征。该特征的应用将训练和验证队列分为高风险和低风险组。随后,通过对受试者工作特征(ROC)曲线进行独立分析来验证该模型。进一步比较了两个风险分组在肿瘤微环境、免疫细胞浸润、免疫治疗反应和药物敏感性方面的差异。该特征由四个与双硫死亡相关的基因构建而成:溶质载体家族7成员11(SLC7A11)、溶质载体家族3成员2(SLC3A2)、NCKAP1和糖原合成酶1(GYS1)。根据ROC曲线,该特征对预测LUAD预后有效。此外,该预后特征与LUAD中化疗药物的敏感性和免疫治疗的疗效相关。最后,通过外部验证,我们表明NCKAP1与LUAD细胞的肿瘤迁移、增殖和侵袭相关。GYS1影响肿瘤微环境中的免疫细胞,尤其是M2巨噬细胞浸润。双硫死亡四基因模型可以可靠地预测LUAD患者的预后,从而为临床应用和免疫治疗提供有价值的信息。