School of Science, University of Waikato, Hamilton, New Zealand.
School of Health, University of Waikato, Hamilton, New Zealand.
BMC Microbiol. 2024 Jan 20;24(1):29. doi: 10.1186/s12866-024-03193-9.
The ATP-dependent DNA ligase Lig E is present as an accessory DNA ligase in numerous proteobacterial genomes, including many disease-causing species. Here we have constructed a genomic Lig E knock-out in the obligate human pathogen Neisseria gonorrhoeae and characterised its growth and infection phenotype.
This demonstrates that N. gonorrhoeae Lig E is a non-essential gene and its deletion does not cause defects in replication or survival of DNA-damaging stressors. Knock-out strains were partially defective in biofilm formation on an artificial surface as well as adhesion to epithelial cells. In addition to in vivo characterisation, we have recombinantly expressed and assayed N. gonorrhoeae Lig E and determined the crystal structure of the enzyme-adenylate engaged with DNA substrate in an open non-catalytic conformation.
These findings, coupled with the predicted extracellular/ periplasmic location of Lig E indicates a role in extracellular DNA joining as well as providing insight into the binding dynamics of these minimal DNA ligases.
ATP 依赖的 DNA 连接酶 LigE 作为一种辅助 DNA 连接酶存在于许多变形杆菌基因组中,包括许多致病物种。在这里,我们构建了专性人类病原体淋病奈瑟菌基因组 LigE 的敲除,并对其生长和感染表型进行了特征描述。
这表明淋病奈瑟菌 LigE 是一个非必需基因,其缺失不会导致复制缺陷或对 DNA 损伤应激的生存能力下降。敲除株在人工表面上形成生物膜以及与上皮细胞黏附的能力部分受损。除了体内特性的描述,我们还重组表达和检测了淋病奈瑟菌 LigE,并确定了酶-腺苷酸与 DNA 底物结合的开放非催化构象的晶体结构。
这些发现,加上 LigE 的预测的细胞外/周质位置,表明其在细胞外 DNA 连接中具有作用,并为这些最小 DNA 连接酶的结合动力学提供了见解。