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大肠杆菌 OQ866153 合成 Enterobatin 的特性分析与统计优化。

Characterization and Statistical Optimization of Enterobatin Synthesized by Escherichia coli OQ866153.

机构信息

Botany and Microbiology Department, Faculty of Science, Helwan University, Helwan, Cairo, 11795, Egypt.

出版信息

Biochem Genet. 2024 Oct;62(5):3920-3945. doi: 10.1007/s10528-023-10626-z. Epub 2024 Jan 21.

Abstract

Microorganisms produce siderophores, which are secondary metabolites with a high affinity for iron. Siderophores have received significant attention due to their diverse applications in ecological and clinical research. In this study, siderophores production by Escherichia coli OQ866153 was optimized using two-stage statistical approach involving Plackett-Burman design (PBD) and response surface methodology (RSM) using central composite design (CCD). Out of 23 variables, succinate, tryptophan, NaHPO, CaCl, agitation, and KHPO were found to have the most significant effect on siderophores production in the first optimization stage with the highest SU% of 43.67%. In the second stage, RSM using CCD was utilized, and the optimal conditions were determined to be 0.3 g/l succinate, 0 g/l tryptophan, 6 g/l NaHPO, 0.1 g/l CaCl, 150 RPM agitation, and 0.6 g/l KHPO, resulting in a maximum siderophore units (SU%) of 89.13%. The model was significant, as indicated by the model f-value of 314.14 (p-value = 0.0004) and coefficient of determination R of 0.9950. During validation experiments, the obtained maximum SU% was increased up to 87.1472%, which was two times as the value obtained under ordinary conditions (46.62%). The produced siderophores were purified and characterized using H, C NMR, IR spectroscopy. The obtained results indicated that the compound was enterobactin and entABCDEF genes were further detected in Escherichia coli OQ866153 extracted DNA. To our knowledge, this is the first report of statistical optimization for enterobactin synthesis by an E. coli strain isolated from a clinical source in Egypt.

摘要

微生物产生具有高亲和力的铁的次生代谢物——铁载体。由于其在生态和临床研究中的广泛应用,铁载体受到了极大的关注。在这项研究中,采用两阶段统计方法(包括 Plackett-Burman 设计(PBD)和响应面法(RSM)使用中心复合设计(CCD))优化了大肠杆菌 OQ866153 的铁载体生产。在 23 个变量中,发现琥珀酸盐、色氨酸、NaHPO、CaCl、搅拌和 KHPO 对铁载体生产的影响最大,在第一优化阶段的 SU%最高为 43.67%。在第二阶段,使用 CCD 的 RSM 被利用,确定了最佳条件为 0.3 g/l 琥珀酸盐、0 g/l 色氨酸、6 g/l NaHPO、0.1 g/l CaCl、150 RPM 搅拌和 0.6 g/l KHPO,得到最大铁载体单位(SU%)为 89.13%。该模型是显著的,如模型 f 值为 314.14(p 值=0.0004)和决定系数 R 为 0.9950 所示。在验证实验中,获得的最大 SU%增加到 87.1472%,是普通条件(46.62%)下获得值的两倍。使用 H、C NMR、IR 光谱对所产生的铁载体进行了纯化和表征。获得的结果表明,该化合物是肠杆菌素,并且在从埃及临床来源分离的大肠杆菌 OQ866153 提取的 DNA 中进一步检测到 entABCDEF 基因。据我们所知,这是首次报道通过埃及临床来源的大肠杆菌菌株进行肠杆菌素合成的统计优化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5953/11427530/c383d41cd15a/10528_2023_10626_Fig1_HTML.jpg

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