• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

(菊科)普鲁斯基和安德伯氏(Buch.-Ham. ex D.Don)叶绿体基因组的特征分析和系统发育分析

Characterization and phylogenetic analysis of the chloroplast genome of (Buch.-Ham. ex D.Don) Pruski & Anderb. (Asteraceae).

作者信息

Luo Junjia, Liu Xiaofeng, Li Tingyu, Chen Hui, Qu Tianmeng, Wang Yueguang, Yu Shuhua, Fu Zhixi

机构信息

Ministry of Education, Key Laboratory of Land Resources Evaluation and Monitoring in Southwest (Sichuan Normal University), Chengdu, China.

College of Life Sciences, Sichuan Normal University, Chengdu, China.

出版信息

Mitochondrial DNA B Resour. 2024 Jan 25;9(1):186-190. doi: 10.1080/23802359.2024.2306203. eCollection 2024.

DOI:10.1080/23802359.2024.2306203
PMID:38282979
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10812854/
Abstract

a valuable medicinal plant of genus in the tribe Inuleae, is predominantly found in China, Bhutan, India, Malaysia, Nepal, Pakistan, Thailand, and Vietnam. However, the genomic studies of are limited. In this study, we successfully sequenced and assembled the complete chloroplast genome of . The chloroplast genome is 150,819 bp in length with a 37.73% GC content. The chloroplast genome has a quadripartite structure, consisting of a large single-copy region of 82,731 bp, a small single-copy region of 18,168 bp, and a pair of inverted repeat sequences of 24,960 bp. The genome contains 133 genes. Among these genes, there are 88 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogeny reconstructed from data of the complete chloroplast genome indicated that is closely related to in the tribe Inuleae. Analyzing and reporting the chloroplast genome of will establish a solid theoretical and data foundation for the efficient development, conservation, and utilization of this plant species.

摘要

作为旋覆花族中一个属的一种珍贵药用植物,主要分布在中国、不丹、印度、马来西亚、尼泊尔、巴基斯坦、泰国和越南。然而,关于该属植物的基因组研究有限。在本研究中,我们成功测序并组装了该属植物的完整叶绿体基因组。叶绿体基因组长度为150,819 bp,GC含量为37.73%。叶绿体基因组具有四分体结构,由一个82,731 bp的大单拷贝区域、一个18,168 bp的小单拷贝区域和一对24,960 bp的反向重复序列组成。该基因组包含133个基因。其中,有88个蛋白质编码基因、37个tRNA基因和8个rRNA基因。基于完整叶绿体基因组数据重建的系统发育表明,该属植物与旋覆花族中的另一植物密切相关。分析和报道该属植物的叶绿体基因组将为该植物物种的高效开发、保护和利用奠定坚实的理论和数据基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b0f7/10812854/cb6b6a328de6/TMDN_A_2306203_F0003_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b0f7/10812854/1e2ecc8af221/TMDN_A_2306203_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b0f7/10812854/44dd78498c9a/TMDN_A_2306203_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b0f7/10812854/cb6b6a328de6/TMDN_A_2306203_F0003_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b0f7/10812854/1e2ecc8af221/TMDN_A_2306203_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b0f7/10812854/44dd78498c9a/TMDN_A_2306203_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b0f7/10812854/cb6b6a328de6/TMDN_A_2306203_F0003_B.jpg

相似文献

1
Characterization and phylogenetic analysis of the chloroplast genome of (Buch.-Ham. ex D.Don) Pruski & Anderb. (Asteraceae).(菊科)普鲁斯基和安德伯氏(Buch.-Ham. ex D.Don)叶绿体基因组的特征分析和系统发育分析
Mitochondrial DNA B Resour. 2024 Jan 25;9(1):186-190. doi: 10.1080/23802359.2024.2306203. eCollection 2024.
2
The complete chloroplast genome of (D.Don) Anderb. (Asteraceae).(菊科)安德伯(D.Don)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2021 Oct 23;6(11):3276-3277. doi: 10.1080/23802359.2021.1993104. eCollection 2021.
3
Complete chloroplast genome of (L.) Less. (Asteraceae) and its phylogenetic analysis.(菊科)少花紫菀(L.)Less.的完整叶绿体基因组及其系统发育分析
Mitochondrial DNA B Resour. 2017 Dec 7;2(2):918-919. doi: 10.1080/23802359.2017.1413299.
4
The complete chloroplast genome sequence of Buch.-Ham. (Ranunculaceae) and its phylogenetic analysis.铁筷子(毛茛科)叶绿体全基因组序列及其系统发育分析。
Mitochondrial DNA B Resour. 2020 Jun 1;5(3):2246-2247. doi: 10.1080/23802359.2020.1771225. eCollection 2020.
5
Phylogenetic relationship and characterization of the complete chloroplast genome of , a folk herbal medicine plant in China.中国民间草药植物[具体植物名称未给出]叶绿体全基因组的系统发育关系及特征分析
Mitochondrial DNA B Resour. 2022 Jun 28;7(6):1148-1150. doi: 10.1080/23802359.2022.2087553. eCollection 2022.
6
Characterization of the complete chloroplast genome of a medicinal plant, (Thymelaeaceae).一种药用植物(瑞香科)叶绿体全基因组的特征分析
Mitochondrial DNA B Resour. 2019 Dec 12;5(1):83-84. doi: 10.1080/23802359.2019.1696249.
7
The complete chloroplast genome of Hemsl, a mangrove associate plant.红树伴生植物海榄雌的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2021 May 24;6(6):1729-1731. doi: 10.1080/23802359.2021.1930600.
8
The complete chloroplast genome of Chun ex Walker, a rare and endangered plant.珍稀濒危植物钟萼木( Chun ex Walker)的完整叶绿体基因组
Mitochondrial DNA B Resour. 2020 Jan 8;5(1):430-431. doi: 10.1080/23802359.2019.1703605.
9
Complete Chloroplast Genome Sequence of the Endemic and Endangered Plant : Genome Structure, Comparative and Phylogenetic Analysis.特有濒危植物完整叶绿体基因组序列:基因组结构、比较和系统发育分析。
Genes (Basel). 2022 Nov 4;13(11):2028. doi: 10.3390/genes13112028.
10
Complete chloroplast genome sequences of Mongolia medicine Artemisia frigida and phylogenetic relationships with other plants.蒙古药材冷蒿的完整叶绿体基因组序列及其与其他植物的系统发育关系。
PLoS One. 2013;8(2):e57533. doi: 10.1371/journal.pone.0057533. Epub 2013 Feb 27.

引用本文的文献

1
The complete chloroplast genome of (Kunze) Kitamura, 1983 (Asteraceae, Mutisieae) and its phylogenetic analysis.1983年北村(菊科,Mutisieae族)的完整叶绿体基因组及其系统发育分析
Mitochondrial DNA B Resour. 2025 Feb 11;10(3):212-217. doi: 10.1080/23802359.2025.2463501. eCollection 2025.

本文引用的文献

1
CPGView: A package for visualizing detailed chloroplast genome structures.CPGView:一个用于可视化详细叶绿体基因组结构的软件包。
Mol Ecol Resour. 2023 Apr;23(3):694-704. doi: 10.1111/1755-0998.13729. Epub 2023 Jan 1.
2
Phylogenetic relationships and generic delimitation in Inuleae subtribe Inulinae (Asteraceae) based on ITS and cpDNA sequence data.基于ITS和cpDNA序列数据对旋覆花亚族(菊科)的系统发育关系及属的界定
Cladistics. 2009 Aug;25(4):319-352. doi: 10.1111/j.1096-0031.2009.00256.x. Epub 2009 May 21.
3
Complete chloroplast genome of glyphosate resistant L. from Australia, with notes on the small single copy (SSC) region orientation.
来自澳大利亚的抗草甘膦长叶车前完整叶绿体基因组,附关于小单拷贝(SSC)区域方向的说明。
Mitochondrial DNA B Resour. 2018 Mar 14;3(1):363-364. doi: 10.1080/23802359.2018.1450682.
4
Complete chloroplast genome of (L.) Less. (Asteraceae) and its phylogenetic analysis.(菊科)少花紫菀(L.)Less.的完整叶绿体基因组及其系统发育分析
Mitochondrial DNA B Resour. 2017 Dec 7;2(2):918-919. doi: 10.1080/23802359.2017.1413299.
5
The complete chloroplast genome sequence of (Asteraceae), a vulnerable endemic species of Korea.菊科一种韩国易危特有物种(学名未给出)的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2017 Sep 11;2(2):650-651. doi: 10.1080/23802359.2017.1375881.
6
The complete chloroplast genome sequence of (Asteraceae), a noxious invasive weed to South China.华南地区一种有害入侵杂草(菊科)的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2016 Aug 31;1(1):603-604. doi: 10.1080/23802359.2016.1209090.
7
The complete chloroplast genome of (Asteraceae, Pertyeae): a shurby endemic species from China.(菊科,佩尔泰族)的完整叶绿体基因组:一种来自中国的灌木特有物种。
Mitochondrial DNA B Resour. 2020 Jan 31;5(1):963-964. doi: 10.1080/23802359.2020.1722763.
8
Comparative chloroplast genome analysis of Artemisia (Asteraceae) in East Asia: insights into evolutionary divergence and phylogenomic implications.东亚蒿属(菊科)叶绿体基因组比较分析:进化分歧与系统基因组学意义。
BMC Genomics. 2020 Jun 22;21(1):415. doi: 10.1186/s12864-020-06812-7.
9
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes.PGA:一个用于叶绿体基因组快速、准确且灵活批量注释的软件包。
Plant Methods. 2019 May 21;15:50. doi: 10.1186/s13007-019-0435-7. eCollection 2019.
10
Species Identification of Assisted by Chloroplast Genome Sequencing.基于叶绿体基因组测序的物种鉴定
Front Genet. 2018 Sep 11;9:374. doi: 10.3389/fgene.2018.00374. eCollection 2018.