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(菊科)安德伯(D.Don)的完整叶绿体基因组。

The complete chloroplast genome of (D.Don) Anderb. (Asteraceae).

作者信息

Xie Li, Zhao Jiale, Liu Rong

机构信息

School of Preclinical Medicine, Chengdu University, Chengdu, China.

Key Laboratory of Resource Biology and Biotechnology in Western China, Northwest University, Xi'an, China.

出版信息

Mitochondrial DNA B Resour. 2021 Oct 23;6(11):3276-3277. doi: 10.1080/23802359.2021.1993104. eCollection 2021.

DOI:10.1080/23802359.2021.1993104
PMID:34712810
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8547826/
Abstract

(D.Don) Anderb. is an annual herbaceous plant used as a vegetable and traditional medicine. Here, we sequenced and assembled the complete chloroplast genome of . The plastome is 151,573 bp in size with a pair of inverted repeat regions (IRs) of 24,849 bp each, a large single-copy region (LSC) of 83,632 bp, and a small single-copy region (SSC) of 18,243 bp. The overall GC content of the whole plastome is 37.33%, and the IR regions are more GC rich (43.08%) than the LSC (35.30%) and SSC (31.03%) regions. It contains 129 genes, including 83 protein-coding genes, 36 tRNAs, eight rRNAs, and two pseudogenes. Phylogenetic analysis showed that is most closely related to . This genome will provide a useful genetic resource for future conservation, evolution, and phylogeny studies of and the tribe Inuleae.

摘要

(D.Don)安德伯氏草是一种一年生草本植物,用作蔬菜和传统药物。在此,我们对其完整叶绿体基因组进行了测序和组装。该质体基因组大小为151,573碱基对,有一对反向重复区域(IRs),每个区域为24,849碱基对,一个大单拷贝区域(LSC)为83,632碱基对,一个小单拷贝区域(SSC)为18,243碱基对。整个质体基因组的总体GC含量为37.33%,IR区域的GC含量(43.08%)比LSC区域(35.30%)和SSC区域(31.03%)更高。它包含129个基因,包括83个蛋白质编码基因、36个tRNA、8个rRNA和2个假基因。系统发育分析表明,它与……关系最为密切。该基因组将为安德伯氏草和旋覆花族未来的保护、进化和系统发育研究提供有用的遗传资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/988e/8547826/eb1a666d6984/TMDN_A_1993104_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/988e/8547826/eb1a666d6984/TMDN_A_1993104_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/988e/8547826/eb1a666d6984/TMDN_A_1993104_F0001_C.jpg

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