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用于与张力烯烃进行生物正交反应的新型四嗪的发现:计算化学

Discovery of new tetrazines for bioorthogonal reactions with strained alkenes computational chemistry.

作者信息

Májek Michal, Trtúšek Matej

机构信息

Comenius University Bratislava, Faculty of Natural Sciences, Department of Organic Chemistry Mlynská Dolina, Ilkovičova 6 842 15 Bratislava Slovakia

出版信息

RSC Adv. 2024 Jan 31;14(7):4345-4351. doi: 10.1039/d3ra08712c.

Abstract

Tetrazines are widely employed reagents in bioorthogonal chemistry, as they react readily with strained alkenes in inverse electron demand Diels-Alder reactions, allowing for selective labeling of biomacromolecules. For optimal performance, tetrazine reagents have to react readily with strained alkenes, while remaining inert against nucleophiles like thiols. Balancing these conditions is a challenge, as reactivity towards strained alkenes and nucleophiles is governed by the same factor - the energy of unoccupied orbitals of tetrazine. Herein, we utilize computational chemistry to screen a set of tetrazine derivatives, aiming to identify structural elements responsible for a better ratio of reactivity with strained alkenes stability against nucleophiles. This advantageous trait is present in sulfone- and sulfoxide-substituted tetrazines. In the end, the distortion/interaction model helped us to identify that the reason behind this enhanced reactivity profile is a secondary orbital interaction between the strained alkene and sulfone-/sulfoxide-substituted tetrazine. This insight can be used to design new tetrazines for bioorthogonal chemistry with improved reactivity/stability profiles.

摘要

四嗪是生物正交化学中广泛使用的试剂,因为它们在逆电子需求的狄尔斯-阿尔德反应中能与张力烯烃迅速反应,从而实现对生物大分子的选择性标记。为了实现最佳性能,四嗪试剂必须能与张力烯烃迅速反应,同时对硫醇等亲核试剂保持惰性。平衡这些条件是一项挑战,因为对张力烯烃和亲核试剂的反应活性受同一因素支配——四嗪未占据轨道的能量。在此,我们利用计算化学筛选了一组四嗪衍生物,旨在确定导致与张力烯烃反应性与对亲核试剂稳定性比例更佳的结构元素。这种有利特性存在于砜和亚砜取代的四嗪中。最后,畸变/相互作用模型帮助我们确定,这种增强的反应活性的背后原因是张力烯烃与砜/亚砜取代的四嗪之间的二级轨道相互作用。这一见解可用于设计具有改进的反应活性/稳定性的新型生物正交化学四嗪。

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