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拟南芥醇脱氢酶的结构和生化特性分析揭示了其独特的功能特性,但具有相似的氧化还原敏感性。

Structural and biochemical characterization of Arabidopsis alcohol dehydrogenases reveals distinct functional properties but similar redox sensitivity.

机构信息

Department of Pharmacy and Biotechnology, University of Bologna, 40126, Bologna, Italy.

Department of Chemistry "G. Ciamician", University of Bologna, 40126, Bologna, Italy.

出版信息

Plant J. 2024 May;118(4):1054-1070. doi: 10.1111/tpj.16651. Epub 2024 Feb 2.

DOI:10.1111/tpj.16651
PMID:38308388
Abstract

Alcohol dehydrogenases (ADHs) are a group of zinc-binding enzymes belonging to the medium-length dehydrogenase/reductase (MDR) protein superfamily. In plants, these enzymes fulfill important functions involving the reduction of toxic aldehydes to the corresponding alcohols (as well as catalyzing the reverse reaction, i.e., alcohol oxidation; ADH1) and the reduction of nitrosoglutathione (GSNO; ADH2/GSNOR). We investigated and compared the structural and biochemical properties of ADH1 and GSNOR from Arabidopsis thaliana. We expressed and purified ADH1 and GSNOR and determined two new structures, NADH-ADH1 and apo-GSNOR, thus completing the structural landscape of Arabidopsis ADHs in both apo- and holo-forms. A structural comparison of these Arabidopsis ADHs revealed a high sequence conservation (59% identity) and a similar fold. In contrast, a striking dissimilarity was observed in the catalytic cavity supporting substrate specificity and accommodation. Consistently, ADH1 and GSNOR showed strict specificity for their substrates (ethanol and GSNO, respectively), although both enzymes had the ability to oxidize long-chain alcohols, with ADH1 performing better than GSNOR. Both enzymes contain a high number of cysteines (12 and 15 out of 379 residues for ADH1 and GSNOR, respectively) and showed a significant and similar responsivity to thiol-oxidizing agents, indicating that redox modifications may constitute a mechanism for controlling enzyme activity under both optimal growth and stress conditions.

摘要

醇脱氢酶(ADHs)是一组锌结合酶,属于中长链脱氢酶/还原酶(MDR)蛋白超家族。在植物中,这些酶具有重要的功能,包括将有毒的醛还原为相应的醇(以及催化相反的反应,即醇氧化;ADH1)和将亚硝基谷胱甘肽(GSNO;ADH2/GSNOR)还原。我们研究并比较了拟南芥 ADH1 和 GSNOR 的结构和生化特性。我们表达和纯化了 ADH1 和 GSNOR,并确定了两个新的结构,即 NADH-ADH1 和 apo-GSNOR,从而完成了拟南芥 ADHs 在apo 和 holo 形式下的结构全景。这些拟南芥 ADHs 的结构比较表明,它们具有高度的序列保守性(59%的同一性)和相似的折叠。然而,在支持底物特异性和容纳的催化腔中观察到明显的不相似性。一致地,ADH1 和 GSNOR 对其底物(乙醇和 GSNO)表现出严格的特异性,尽管两种酶都具有氧化长链醇的能力,ADH1 的性能优于 GSNOR。两种酶都含有大量的半胱氨酸(ADH1 和 GSNOR 分别有 12 个和 15 个,占 379 个残基),并且对硫醇氧化剂表现出显著且相似的反应性,表明氧化还原修饰可能是控制酶活性的一种机制在最佳生长和应激条件下。

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