Clinical Biochemistry Department, Faculty of Medical Sciences, Iran University of Medical Sciences, Tehran, Iran.
Cellular and Molecular Research Center, Iran University of Medical Sciences, Tehran, Iran.
Sci Rep. 2024 Feb 10;14(1):3424. doi: 10.1038/s41598-024-54086-w.
The ST-elevation Myocardial Infarction (STEMI) and Non-ST-elevation Myocardial Infarction (NSTEMI) might occur because of coronary artery stenosis. The gene biomarkers apply to the clinical diagnosis and therapeutic decisions in Myocardial Infarction. The aim of this study was to introduce, enrich and estimate timely the blood gene profiles based on the high-throughput data for the molecular distinction of STEMI and NSTEMI. The text mining data (50 genes) annotated with DisGeNET data (144 genes) were merged with the GEO gene expression data (5 datasets) using R software. Then, the STEMI and NSTEMI networks were primarily created using the STRING server, and improved using the Cytoscape software. The high-score genes were enriched using the KEGG signaling pathways and Gene Ontology (GO). Furthermore, the genes were categorized to determine the NSTEMI and STEMI gene profiles. The time cut-off points were identified statistically by monitoring the gene profiles up to 30 days after Myocardial Infarction (MI). The gene heatmaps were clearly created for the STEMI (high-fold genes 69, low-fold genes 45) and NSTEMI (high-fold genes 68, low-fold genes 36). The STEMI and NSTEMI networks suggested the high-score gene profiles. Furthermore, the gene enrichment suggested the different biological conditions for STEMI and NSTEMI. The time cut-off points for the NSTEMI (4 genes) and STEMI (13 genes) gene profiles were established up to three days after Myocardial Infarction. The study showed the different pathophysiologic conditions for STEMI and NSTEMI. Furthermore, the high-score gene profiles are suggested to measure up to 3 days after MI to distinguish the STEMI and NSTEMI.
ST 段抬高型心肌梗死(STEMI)和非 ST 段抬高型心肌梗死(NSTEMI)可能由于冠状动脉狭窄引起。基因生物标志物适用于心肌梗死的临床诊断和治疗决策。本研究旨在介绍、丰富和及时估计基于高通量数据的血液基因谱,用于 STEMI 和 NSTEMI 的分子区分。使用 R 软件将带有 DisGeNET 数据(144 个基因)注释的文本挖掘数据(50 个基因)与 GEO 基因表达数据(5 个数据集)合并。然后,使用 STRING 服务器初步创建 STEMI 和 NSTEMI 网络,并使用 Cytoscape 软件进行改进。使用 KEGG 信号通路和基因本体论(GO)对高分基因进行富集。此外,对基因进行分类以确定 NSTEMI 和 STEMI 基因谱。通过监测心肌梗死后 30 天内的基因谱,通过统计学确定时间截止点。为 STEMI(高倍数基因 69 个,低倍数基因 45 个)和 NSTEMI(高倍数基因 68 个,低倍数基因 36 个)清楚地创建了基因热图。STEMI 和 NSTEMI 网络表明了高分基因谱。此外,基因富集表明 STEMI 和 NSTEMI 的不同生物学条件。确定了 NSTEMI(4 个基因)和 STEMI(13 个基因)基因谱的时间截止点,直至心肌梗死后三天。该研究表明 STEMI 和 NSTEMI 的不同病理生理条件。此外,建议在 MI 后 3 天内测量高分基因谱以区分 STEMI 和 NSTEMI。