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通过综合分析鉴定急性心肌梗死和心力衰竭的生物标志物和免疫浸润。

Identification of biomarkers and immune infiltration in acute myocardial infarction and heart failure by integrated analysis.

机构信息

Department of Cardiology, Xuzhou Central Hospital, Xuzhou Institute of Cardiovascular Disease, Xuzhou Clinical School of Nanjing Medical University, No. 199 Jiefang South Road, Xuzhou 221009, PR China.

Department of Ultrasonography, Xuzhou Central Hospital, Xuzhou Clinical School of Nanjing Medical University, No. 199 Jiefang South Road, Xuzhou 221009, PR China.

出版信息

Biosci Rep. 2023 Jul 26;43(7). doi: 10.1042/BSR20222552.

Abstract

The mortality of heart failure after acute myocardial infarction (AMI) remains high. The aim of the present study was to analyze hub genes and immune infiltration in patients with AMI and heart failure (HF). The study utilized five publicly available gene expression datasets from peripheral blood in patients with AMI who either developed or did not develop HF. The unbiased patterns of 24 immune cell were estimated by xCell algorithm. Single-cell RNA sequencing data were used to examine the immune cell infiltration in heart failure patients. Hub genes were validated by quantitative reverse transcription-PCR (RT-qPCR). In comparison with the coronary heart disease (CHD) group, immune infiltration analysis of AMI patients showed that macrophages M1, macrophages, monocytes, natural killer (NK) cells, and NKT cells were the five most highly activated cell types. Five common immune-related genes (S100A12, AQP9, CSF3R, S100A9, and CD14) were identified as hub genes associated with AMI. Using RT-qPCR, we confirmed FOS, DUSP1, CXCL8, and NFKBIA as the potential biomarkers to identify AMI patients at risk of HF. The study identified several transcripts that differentiate between AMI and CHD, and between HF and non-HF patients. These findings could improve our understanding of the immune response in AMI and HF, and allow for early identification of AMI patients at risk of HF.

摘要

急性心肌梗死(AMI)后心力衰竭的死亡率仍然很高。本研究旨在分析 AMI 合并心力衰竭(HF)患者的关键基因和免疫浸润。该研究利用了五个公开的 AMI 患者外周血基因表达数据集,这些患者要么发生了 HF,要么没有发生 HF。xCell 算法用于估计 24 种免疫细胞的无偏模式。单细胞 RNA 测序数据用于检查心力衰竭患者的免疫细胞浸润。通过定量逆转录聚合酶链反应(RT-qPCR)验证关键基因。与冠心病(CHD)组相比,AMI 患者的免疫浸润分析显示,M1 巨噬细胞、巨噬细胞、单核细胞、自然杀伤(NK)细胞和 NKT 细胞是五种最活跃的细胞类型。确定了五个共同的免疫相关基因(S100A12、AQP9、CSF3R、S100A9 和 CD14)作为与 AMI 相关的关键基因。通过 RT-qPCR,我们证实 FOS、DUSP1、CXCL8 和 NFKBIA 是潜在的生物标志物,可以识别有 HF 风险的 AMI 患者。该研究鉴定了一些可区分 AMI 和 CHD 以及 HF 和非 HF 患者的转录本。这些发现可以提高我们对 AMI 和 HF 中免疫反应的理解,并允许早期识别有 HF 风险的 AMI 患者。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af02/10329185/12ac97c6a188/bsr-43-bsr20222552-g1.jpg

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