Updating view of membrane transport proteins by simulation studies.
作者信息
Sumikama Takashi, Corry Ben, Ono Junichi, Kobayashi Chigusa, Okazaki Kei-Ichi
机构信息
PRESTO, JST, Kawaguchi, Saitama 332-0012, Japan.
Nano Life Science Institute, Kanazawa University, Kanazawa, Ishikawa 920-1192, Japan.
出版信息
Biophys Physicobiol. 2023 Nov 2;20(4):e200041. doi: 10.2142/biophysico.bppb-v20.0041. eCollection 2023.
Abstract
摘要
相似文献
1
Updating view of membrane transport proteins by simulation studies.通过模拟研究更新对膜转运蛋白的认识。
Biophys Physicobiol. 2023 Nov 2;20(4):e200041. doi: 10.2142/biophysico.bppb-v20.0041. eCollection 2023.
2
Spatial updating grand canonical Monte Carlo algorithms for fluid simulation: generalization to continuous potentials and parallel implementation.用于流体模拟的空间更新巨正则蒙特卡罗算法：推广到连续势及并行实现
J Chem Phys. 2007 Nov 21;127(19):194103. doi: 10.1063/1.2799192.
3
Platelet MAO activity and COMT Val158Met genotype interaction predicts visual working memory updating efficiency.血小板 MAO 活性与 COMT Val158Met 基因型相互作用预测视觉工作记忆更新效率。
Behav Brain Res. 2021 Jun 11;407:113255. doi: 10.1016/j.bbr.2021.113255. Epub 2021 Mar 18.
5
Lack of set size effects in spatial updating: Evidence for offline updating.空间更新中集合大小效应的缺失：离线更新的证据。
J Exp Psychol Learn Mem Cogn. 2006 Jul;32(4):854-66. doi: 10.1037/0278-7393.32.4.854.
6
Individual differences in updating are not related to reasoning ability and working memory capacity.个体更新差异与推理能力和工作记忆容量无关。
J Exp Psychol Gen. 2022 Jun;151(6):1341-1357. doi: 10.1037/xge0001141. Epub 2022 Feb 24.
7
When Beliefs Face Reality: An Integrative Review of Belief Updating in Mental Health and Illness.当信念面对现实：心理健康与疾病中信念更新的综合综述
Perspect Psychol Sci. 2021 Mar;16(2):247-274. doi: 10.1177/1745691620931496. Epub 2020 Aug 20.
8
Application of the view factor model on the particle-in-cell and Monte Carlo collision code.视因子模型在粒子模拟和蒙特卡洛碰撞代码中的应用。
Phys Rev E. 2020 Sep;102(3-1):033311. doi: 10.1103/PhysRevE.102.033311.
9
Parallel canonical Monte Carlo simulations through sequential updating of particles.通过粒子的顺序更新进行并行规范蒙特卡罗模拟。
J Chem Phys. 2009 Apr 7;130(13):134109. doi: 10.1063/1.3097528.
10
Dynamic updating of clinical survival prediction models in a changing environment.在不断变化的环境中对临床生存预测模型进行动态更新。
Diagn Progn Res. 2023 Dec 12;7(1):24. doi: 10.1186/s41512-023-00163-z.
本文引用的文献
1
Voltage sensors of a Na channel dissociate from the pore domain and form inter-channel dimers in the resting state.钠通道的电压传感器在静息状态下与孔域分离，并形成通道间二聚体。
Nat Commun. 2023 Dec 19;14(1):7835. doi: 10.1038/s41467-023-43347-3.
2
Structure and mechanism of oxalate transporter OxlT in an oxalate-degrading bacterium in the gut microbiota.肠道微生物群中草酸降解菌草酸转运蛋白 OxlT 的结构与机制
Nat Commun. 2023 Apr 3;14(1):1730. doi: 10.1038/s41467-023-36883-5.
3
Multiple sub-state structures of SERCA2b reveal conformational overlap at transition steps during the catalytic cycle.SERCA2b的多个亚状态结构揭示了催化循环中过渡步骤的构象重叠。
Cell Rep. 2022 Dec 6;41(10):111760. doi: 10.1016/j.celrep.2022.111760.
4
Hydroxide Ion Mechanism for Long-Range Proton Pumping in the Third Proton Transfer of Bacteriorhodopsin.菌紫质中第三个质子转移的长程质子泵浦的氢氧根离子机制。
Chemphyschem. 2022 Nov 18;23(22):e202200109. doi: 10.1002/cphc.202200109. Epub 2022 Aug 23.
5
Conformational alterations in unidirectional ion transport of a light-driven chloride pump revealed using X-ray free electron lasers.利用 X 射线自由电子激光揭示光驱动氯离子泵单向离子传输的构象变化。
Proc Natl Acad Sci U S A. 2022 Mar 1;119(9). doi: 10.1073/pnas.2117433119.
6
Structural and energetic analysis of metastable intermediate states in the E1P-E2P transition of Ca-ATPase.钙泵 E1P-E2P 转变中不稳定中间态的结构与能量分析。
Proc Natl Acad Sci U S A. 2021 Oct 5;118(40). doi: 10.1073/pnas.2105507118. Epub 2021 Sep 30.
7
Conductance selectivity of Na across the K channel via Na trapped in a tortuous trajectory.Na 通过曲折轨迹捕获的 Na 跨 K 通道的电导选择性。
Proc Natl Acad Sci U S A. 2021 Mar 23;118(12). doi: 10.1073/pnas.2017168118.
8
Hydroxide Ion Carrier for Proton Pumps in Bacteriorhodopsin: Primary Proton Transfer.细菌视紫红质中质子泵的氢氧根离子载体：初级质子转移
J Phys Chem B. 2020 Oct 1;124(39):8524-8539. doi: 10.1021/acs.jpcb.0c05507. Epub 2020 Sep 17.
9
Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.肌浆网钙ATP酶2b（SERCA2b）的冷冻电镜结构揭示了管腔延伸尾部的调控机制。
Sci Adv. 2020 Aug 12;6(33):eabb0147. doi: 10.1126/sciadv.abb0147. eCollection 2020 Aug.
10
Queueing arrival and release mechanism for K permeation through a potassium channel.钾离子通道中钾离子渗透的排队到达和释放机制。
J Physiol Sci. 2019 Nov;69(6):919-930. doi: 10.1007/s12576-019-00706-4. Epub 2019 Aug 27.
Zotero 插件