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TRIM56:通过泛癌症和单细胞分析揭示的胶质母细胞瘤有希望的预后免疫生物标志物。

TRIM56: a promising prognostic immune biomarker for glioma revealed by pan-cancer and single-cell analysis.

机构信息

Department of Neurosurgery, Shandong Provincial Qianfoshan Hospital, Shandong University, Jinan, China.

Department of Neurosurgery, Shandong Provincial Hospital, Shandong University, Jinan, China.

出版信息

Front Immunol. 2024 Jan 29;15:1327898. doi: 10.3389/fimmu.2024.1327898. eCollection 2024.


DOI:10.3389/fimmu.2024.1327898
PMID:38348047
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10859405/
Abstract

Tripartite-motif 56 (TRIM56) is a member of the TRIM family, and was shown to be an interferon-inducible E3 ubiquitin ligase that can be overexpressed upon stimulation with double-stranded DNA to regulate stimulator of interferon genes (STING) to produce type I interferon and thus mediate innate immune responses. Its role in tumors remains unclear. In this study, we investigated the relationship between the expression of the TRIM56 gene and its prognostic value in pan-cancer, identifying TRIM56 expression as an adverse prognostic factor in glioma patients. Therefore, glioma was selected as the primary focus of our investigation. We explored the differential expression of TRIM56 in various glioma subtypes and verified its role as an independent prognostic factor in gliomas. Our research revealed that TRIM56 is associated with malignant biological behaviors in gliomas, such as proliferation, migration, and invasion. Additionally, it can mediate M2 polarization of macrophages in gliomas. The results were validated and . Furthermore, we utilized single-cell analysis to investigate the impact of TRIM56 expression on cell communication between glioma cells and non-tumor cells. We constructed a multi-gene signature based on cell markers of tumor cells with high TRIM56 expression to enhance the prediction of cancer patient prognosis. In conclusion, our study demonstrates that TRIM56 serves as a reliable immune-related prognostic biomarker in glioma.

摘要

三结构域蛋白 56(TRIM56)是 TRIM 家族的一员,被证明是一种干扰素诱导的 E3 泛素连接酶,在双链 DNA 刺激下可以过表达,以调节干扰素基因刺激物(STING)产生 I 型干扰素,从而介导固有免疫反应。其在肿瘤中的作用尚不清楚。在这项研究中,我们研究了 TRIM56 基因的表达与泛癌中的预后价值之间的关系,发现 TRIM56 表达是胶质母细胞瘤患者不良预后的一个因素。因此,胶质母细胞瘤被选为我们研究的主要焦点。我们探讨了 TRIM56 在各种胶质母细胞瘤亚型中的差异表达,并验证了其在胶质母细胞瘤中作为独立预后因素的作用。我们的研究表明,TRIM56 与胶质母细胞瘤中的恶性生物学行为有关,如增殖、迁移和侵袭。此外,它可以介导胶质母细胞瘤中巨噬细胞的 M2 极化。结果得到了验证。此外,我们利用单细胞分析研究了 TRIM56 表达对胶质母细胞瘤中肿瘤细胞与非肿瘤细胞之间细胞通讯的影响。我们构建了一个基于高表达 TRIM56 的肿瘤细胞标志物的多基因特征,以增强对癌症患者预后的预测。总之,我们的研究表明,TRIM56 是胶质母细胞瘤中一种可靠的免疫相关预后生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/34be71b308c5/fimmu-15-1327898-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/4bf8d6d35b21/fimmu-15-1327898-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/eb89f23255be/fimmu-15-1327898-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/77d35c565824/fimmu-15-1327898-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/99296cdb3555/fimmu-15-1327898-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/514e0e35a964/fimmu-15-1327898-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/e18517036345/fimmu-15-1327898-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/fbd443024a3b/fimmu-15-1327898-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/9dace8448b8a/fimmu-15-1327898-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/34be71b308c5/fimmu-15-1327898-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/4bf8d6d35b21/fimmu-15-1327898-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/eb89f23255be/fimmu-15-1327898-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/77d35c565824/fimmu-15-1327898-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/99296cdb3555/fimmu-15-1327898-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/514e0e35a964/fimmu-15-1327898-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/e18517036345/fimmu-15-1327898-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/fbd443024a3b/fimmu-15-1327898-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/9dace8448b8a/fimmu-15-1327898-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae21/10859405/34be71b308c5/fimmu-15-1327898-g009.jpg

相似文献

[1]
TRIM56: a promising prognostic immune biomarker for glioma revealed by pan-cancer and single-cell analysis.

Front Immunol. 2024

[2]
Impaired Antiviral Responses to Extracellular Double-Stranded RNA and Cytosolic DNA, but Not to Interferon-α Stimulation, in TRIM56-Deficient Cells.

Viruses. 2022-1-5

[3]
TRIM56 promotes malignant progression of glioblastoma by stabilizing cIAP1 protein.

J Exp Clin Cancer Res. 2022-12-6

[4]
TRIM56 acts through the IQGAP1-CDC42 signaling axis to promote glioma cell migration and invasion.

Cell Death Dis. 2023-3-4

[5]
The Functions of TRIM56 in Antiviral Innate Immunity and Tumorigenesis.

Int J Mol Sci. 2023-3-6

[6]
The ubiquitin ligase TRIM56 regulates innate immune responses to intracellular double-stranded DNA.

Immunity. 2010-11-11

[7]
TRIM56-mediated production of type I interferon inhibits intracellular replication of .

Microbiol Spectr. 2024-4-2

[8]
TRIM56 is a virus- and interferon-inducible E3 ubiquitin ligase that restricts pestivirus infection.

J Virol. 2011-2-2

[9]
Comprehensive analysis of the prognostic and immunological signature of eight Tripartitemotif (TRIM) family molecules in human gliomas.

Aging (Albany NY). 2023-6-24

[10]
Poly r(C) Binding Protein 1 Regulates Posttranscriptional Expression of the Ubiquitin Ligase TRIM56 in Ovarian Cancer.

IUBMB Life. 2018-10-3

引用本文的文献

[1]
The oncogenic role of TRIM56 in pancreatic cancer via the TRAF6/NF-kB axis.

J Mol Histol. 2025-6-21

[2]
Unveiling the multifaceted functions of TRIM proteins in glioma pathogenesis.

Transl Oncol. 2025-8

[3]
Tissue macrophages: origin, heterogenity, biological functions, diseases and therapeutic targets.

Signal Transduct Target Ther. 2025-3-7

[4]
TRIMming down Flavivirus Infections.

Viruses. 2024-8-6

本文引用的文献

[1]
Roles of STAT3 in the pathogenesis and treatment of glioblastoma.

Front Cell Dev Biol. 2023-2-27

[2]
Tumor microenvironment: barrier or opportunity towards effective cancer therapy.

J Biomed Sci. 2022-10-17

[3]
TRIM56 positively regulates TNFα-induced NF-κB signaling by enhancing the ubiquitination of TAK1.

Int J Biol Macromol. 2022-10-31

[4]
Diagnostic test accuracy and cost-effectiveness of tests for codeletion of chromosomal arms 1p and 19q in people with glioma.

Cochrane Database Syst Rev. 2022-3-2

[5]
Single-cell analysis of human glioma and immune cells identifies S100A4 as an immunotherapy target.

Nat Commun. 2022-2-9

[6]
Epigenetic modulation of antitumor immunity for improved cancer immunotherapy.

Mol Cancer. 2021-12-20

[7]
Microbiota triggers STING-type I IFN-dependent monocyte reprogramming of the tumor microenvironment.

Cell. 2021-10-14

[8]
Inference and analysis of cell-cell communication using CellChat.

Nat Commun. 2021-2-17

[9]
TRIM56 suppresses the malignant development of hepatocellular carcinoma via targeting RBM24 and inactivating the Wnt signaling.

Eur Rev Med Pharmacol Sci. 2021-1

[10]
Diffuse Glioma Heterogeneity and Its Therapeutic Implications.

Cancer Discov. 2021-3

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