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从亚洲疣螈(有尾目:蝾螈科)的RAD简化基因组中分离并鉴定17个微卫星DNA位点。

Isolation and characterisation of 17 microsatellite DNA loci from RAD reduced-representation genomes for Asian warty newts, genus (Caudata: Salamandridae).

作者信息

Mao Ming-Le, Luo Tao, Li Wei, Xiao Ning, Deng Huai-Qing, Zhou Jiang

机构信息

School of Karst Science, Guizhou Normal University, Guiyang, China School of Karst Science, Guizhou Normal University Guiyang China.

School of Life Sciences, Guizhou Normal University, Guiyang, China School of Life Sciences, Guizhou Normal University Guiyang China.

出版信息

Biodivers Data J. 2024 Feb 2;12:e113979. doi: 10.3897/BDJ.12.e113979. eCollection 2024.

Abstract

Asian warty newts, genus , are endemic to southern China and northern Vietnam. Despite the achievements in biodiversity, molecular systematics and biogeography of species in this genus, population genetic diversity studies are lacking due to the lack of economical and available genetic markers. In this study, we developed 17 highly polymorphic microsatellite loci from RAD simplified genomic data for the Asian warty newts, genus and successfully completed cross-species amplification tests on 20 samples of four species of . These microsatellite markers can be used as important tools to study population genetic structure, levels of gene flow, population differentiation, mating systems and landscape genetics within the genus and, thus, to make scientific conservation decisions and actions for the conservation of these rare and endangered amphibians.

摘要

疣螈属亚洲疣螈原产于中国南部和越南北部。尽管在该属物种的生物多样性、分子系统学和生物地理学方面取得了成果,但由于缺乏经济实用的遗传标记,种群遗传多样性研究仍很匮乏。在本研究中,我们从简化基因组数据中开发了17个高度多态的微卫星位点用于亚洲疣螈属,并成功地对该属4个物种的20个样本进行了跨物种扩增测试。这些微卫星标记可作为重要工具,用于研究疣螈属内的种群遗传结构、基因流动水平、种群分化、交配系统和景观遗传学,从而为保护这些珍稀濒危两栖动物做出科学的保护决策和行动。

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Microsatellite markers: what they mean and why they are so useful.微卫星标记:它们的含义以及为何如此有用。
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