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捕食线虫真菌体内的内共生细菌及其在氮循环中的潜在作用。

Endosymbiotic bacteria within the nematode-trapping fungus and their potential roles in nitrogen cycling.

作者信息

Zheng Hua, Chen Tong, Li Wenjie, Hong Jianan, Xu Jianping, Yu Zefen

机构信息

Laboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, China.

School of Life Sciences, Yunnan University, Kunming, China.

出版信息

Front Microbiol. 2024 Jan 29;15:1349447. doi: 10.3389/fmicb.2024.1349447. eCollection 2024.

Abstract

Endosymbiotic bacteria (ESB) have important effects on their hosts, contributing to its growth, reproduction and biological functions. Although the effects of exogenous bacteria on the trap formation of nematode-trapping fungi (NTF) have been revealed, the effects of ESB on NTF remain unknown. In this study, we investigated the species diversity of ESB in the NTF using high-throughput sequencing and culture-dependent approaches, and compared bacterial profiles to assess the effects of strain source and culture media on . PICRUSt2 and FAPROTAX were used to predict bacterial function. Our study revealed that bacterial communities in displayed high diversity and heterogeneity, with Proteobacteria, Firmicutes, Bacteroidetes and Actinobacteria as the dominant phyla. The ESB between groups isolated from different habitats and cultured in the same medium were more similar to each other than the other groups isolated from the same habitat but cultured in different media. Function analysis predicted a broad and diverse functional repertoire of ESB in , and unveiled that ESB have the potential to function in five modules of the nitrogen metabolism. We isolated nitrogen-fixing and denitrifying bacteria from the ESB and demonstrated their effects on trap formation of . Among seven bacteria that we tested, three bacterial species , and were found to be efficient in inducing trap formation. In conclusion, this study revealed extensive ESB diversity within NTF and demonstrated that these bacteria likely play important roles in nitrogen cycling, including nematode trap formation.

摘要

内共生细菌(ESB)对其宿主具有重要影响,有助于宿主的生长、繁殖和生物学功能。尽管外源细菌对线虫捕食真菌(NTF)陷阱形成的影响已被揭示,但ESB对NTF的影响仍不清楚。在本研究中,我们使用高通量测序和基于培养的方法研究了NTF中ESB的物种多样性,并比较了细菌谱以评估菌株来源和培养基对其的影响。使用PICRUSt2和FAPROTAX预测细菌功能。我们的研究表明,NTF中的细菌群落具有高度的多样性和异质性,变形菌门、厚壁菌门、拟杆菌门和放线菌门为优势菌门。从不同栖息地分离并在相同培养基中培养的NTF组之间的ESB彼此比从相同栖息地分离但在不同培养基中培养的其他组更相似。功能分析预测了NTF中ESB广泛多样的功能库,并揭示ESB有可能在氮代谢的五个模块中发挥作用。我们从ESB中分离出固氮和反硝化细菌,并证明了它们对NTF陷阱形成的影响。在我们测试的七种细菌中,发现三种细菌,即[具体细菌名称1]、[具体细菌名称2]和[具体细菌名称3]在诱导陷阱形成方面很有效。总之,本研究揭示了NTF中广泛的ESB多样性,并证明这些细菌可能在氮循环中发挥重要作用,包括线虫陷阱的形成。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/99c1/10860758/35343dd4219b/fmicb-15-1349447-g001.jpg

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