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高度近视患者玻璃体液中的 circRNA 表达谱和调控网络。

CircRNA expression profiles and regulatory networks in the vitreous humor of people with high myopia.

机构信息

The Department of Ophthalmology, First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, People's Republic of China.

The Department of Ophthalmology, First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, People's Republic of China.

出版信息

Exp Eye Res. 2024 Apr;241:109827. doi: 10.1016/j.exer.2024.109827. Epub 2024 Feb 12.

Abstract

Myopia is a global health and economic issue. Circular RNAs (circRNAs) have been shown to play an important role in the pathogenesis of many ocular diseases. We first evaluated the circRNA profiles and possible roles in vitreous humor samples of individuals with high myopia by a competitive endogenous RNA (ceRNA) array. Vitreous humor samples were collected from 15 high myopic (5 for ceRNA array, and 10 for qPCR) and 15 control eyes (5 for ceRNA array, and 10 for qPCR) with idiopathic epiretinal membrane (ERM) and macular hole (MH). 486 circRNAs (339 upregulated and 147 downregulated) and 264 mRNAs (202 upregulated and 62 downregulated) were differentially expressed between the high myopia and control groups. The expression of hsa_circ_0033079 (hsa-circDicer1), hsa_circ_0029989 (hsa-circNbea), hsa_circ_0019072 (hsa-circPank1) and hsa_circ_0089716 (hsa-circEhmt1) were validated by qPCR. Pearson analysis and multivariate regression analysis showed positive and significant correlations for axial length with hsa-circNbea and hsa-circPank1. KEGG analysis showed that the target genes of circRNAs were enriched in the mTOR, insulin, cAMP, and VEGF signaling pathways. GO analysis indicated that circRNAs mainly targeted transcription, cytoplasm, and protein binding. CircRNA-associated ceRNA network analysis and PPI network analysis identified several critical genes for myopia. The expression of circNbea, circPank1, miR-145-5p, miR-204-5p, Nras, Itpr1 were validated by qPCR in the sclera of form-deprivation myopia (FDM) mice model. CircPank1/miR-145-5p/NRAS and circNbea/miR-204-5p/ITPR1 were identified and may be important in the progression of myopia. Our findings suggest that circRNAs may contribute to the pathogenesis of myopia and may serve as potential biomarkers.

摘要

近视是一个全球性的健康和经济问题。环状 RNA(circRNA)已被证明在许多眼部疾病的发病机制中发挥重要作用。我们首先通过竞争性内源性 RNA(ceRNA)阵列评估了玻璃体样本中高度近视患者的 circRNA 谱及其可能的作用。收集了 15 名特发性眼后膜(ERM)和黄斑裂孔(MH)的高度近视患者(5 名用于 ceRNA 阵列,10 名用于 qPCR)和 15 名对照眼(5 名用于 ceRNA 阵列,10 名用于 qPCR)的玻璃体样本。高近视组与对照组之间有 486 个 circRNA(339 个上调,147 个下调)和 264 个 mRNA(202 个上调,62 个下调)表达差异。hsa_circ_0033079(hsa-circDicer1)、hsa_circ_0029989(hsa-circNbea)、hsa_circ_0019072(hsa-circPank1)和 hsa_circ_0089716(hsa-circEhmt1)的表达通过 qPCR 进行验证。Pearson 分析和多元回归分析显示,轴向长度与 hsa-circNbea 和 hsa-circPank1 呈正相关和显著相关。KEGG 分析显示,circRNA 的靶基因富集在 mTOR、胰岛素、cAMP 和 VEGF 信号通路中。GO 分析表明,circRNAs 主要靶向转录、细胞质和蛋白质结合。circRNA 相关 ceRNA 网络分析和 PPI 网络分析确定了几种近视的关键基因。qPCR 验证了 circNbea、circPank1、miR-145-5p、miR-204-5p、Nras 和 Itpr1 在形觉剥夺性近视(FDM)小鼠模型巩膜中的表达。鉴定了 circPank1/miR-145-5p/NRAS 和 circNbea/miR-204-5p/ITPR1,可能在近视进展中起重要作用。我们的研究结果表明,circRNAs 可能有助于近视的发病机制,并可能作为潜在的生物标志物。

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